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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181164551
OEIR01226202
146578
Alphaproteobacteria
CGG
Pro
>WENV181164832
OEIR01402854
252328
Alphaproteobacteria
TTT
Lys
>WENV181165208
OEIR01657876
194529
Alphaproteobacteria
TGG
Pro
>WENV181164602
OEIR01252157
146864
Alphaproteobacteria
TGG
Pro
>WENV181165300
OEIR01719601
155902
Alphaproteobacteria
GTG
His
>WENV181164650
OEIR01279971
7609
Alphaproteobacteria
GCT
Ser
>WENV181165107
OEIR01587554
342732
Alphaproteobacteria
CCC
Gly
>WENV181165041
OEIR01536043
23620
Alphaproteobacteria
GCT
Ser
>WENV181164995
OEIR01508571
377852
Alphaproteobacteria
TGT
Thr
>WENV181164645
OEIR01277127
148429
Alphaproteobacteria
CCT
Arg
>WENV181165070
OEIR01556721
148429
Alphaproteobacteria
CCT
Arg
>WENV181164406
OEIR01149288
95924
Alphaproteobacteria
GAG
Leu
>WENV181164034
OEIR01005866
164825
Alphaproteobacteria
GAT
Ile
>WENV181164626
OEIR01266534
144972
Alphaproteobacteria
>WENV181164154
OEIR01036975
339465
Alphaproteobacteria
GGT
Thr
>WENV181165418
OEIR01808342
369678
Alphaproteobacteria
GGT
Thr
>WENV181164967
OEIR01492087
30071
Alphaproteobacteria
CGA
Ser
>WENV181164228
OEIR01065707
316120
Alphaproteobacteria
TGC
Ala
>WENV181164203
OEIR01058270
418532
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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