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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181228880
OFEI01000051
59595
Gammaproteobacteria
GAG
Leu
>WENV181228902
OFEI01000306
148835
Gammaproteobacteria
CAT
Met
>WENV181228885
OFEI01000121
429991
Gammaproteobacteria
GCA
Cys
>WENV181228875
OFEI01000028
72493
Gammaproteobacteria
TAA
Leu
>WENV181228852
OFEI01000006
310681
Gammaproteobacteria
GTG
His
>WENV181228826
OFEI01000001
144730
Gammaproteobacteria
CAT
Met
>WENV181228830
OFEI01000001
144730
Gammaproteobacteria
CAT
Met
>WENV181228903
OFEI01000306
365828
Gammaproteobacteria
CTG
Gln
>WENV181228842
OFEI01000005
145364
Gammaproteobacteria
GGG
Pro
>WENV181228865
OFEI01000016
109060
Gammaproteobacteria
GTA
Tyr
>WENV181228897
OFEI01000283
109060
Gammaproteobacteria
GTA
Tyr
>WENV181228876
OFEI01000030
266823
Gammaproteobacteria
GTT
Asn
>WENV181228879
OFEI01000048
52727
Gammaproteobacteria
GGA
Ser
>WENV181228918
OFEI01001170
176058
Gammaproteobacteria
CAT
Met
>WENV181228861
OFEI01000011
236131
Gammaproteobacteria
GAA
Phe
>WENV181228862
OFEI01000014
236131
Gammaproteobacteria
GAA
Phe
>WENV181228917
OFEI01000998
236131
Gammaproteobacteria
GAA
Phe
>WENV181228835
OFEI01000002
258369
Gammaproteobacteria
GTT
Asn
>WENV181228836
OFEI01000002
258369
Gammaproteobacteria
GTT
Asn
>WENV181228886
OFEI01000121
59391
Gammaproteobacteria
>WENV181228867
OFEI01000025
9458
Gammaproteobacteria
GCT
Ser
>WENV181228905
OFEI01000376
291440
Gammaproteobacteria
TAC
Val
>WENV181228881
OFEI01000051
148834
Gammaproteobacteria
CAT
Met
>WENV181228827
OFEI01000001
103944
Gammaproteobacteria
TAG
Leu
>WENV181228831
OFEI01000001
103944
Gammaproteobacteria
TAG
Leu
>WENV181228874
OFEI01000028
432040
Gammaproteobacteria
GCA
Cys
>WENV181228890
OFEI01000209
96284
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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