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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181308538
OFIS01070693
149229
Betaproteobacteria
TCT
Arg
>WENV181308436
OFIS01021264
266853
Betaproteobacteria
GTG
His
>WENV181307953
OFIS01000058
308813
Betaproteobacteria
TAC
Val
>WENV181308145
OFIS01000334
260088
Betaproteobacteria
CGT
Thr
>WENV181308338
OFIS01005418
59091
Betaproteobacteria
TAG
Leu
>WENV181308547
OFIS01075397
27268
Betaproteobacteria
TGA
Ser
>WENV181308524
OFIS01056083
366686
Betaproteobacteria
CCT
Arg
>WENV181307942
OFIS01000051
253695
Betaproteobacteria
TTT
Lys
>WENV181308481
OFIS01031346
292518
Betaproteobacteria
TTT
Lys
>WENV181308046
OFIS01000154
302964
Betaproteobacteria
GTT
Asn
>WENV181308468
OFIS01027287
280877
Betaproteobacteria
CCG
Arg
>WENV181307943
OFIS01000051
144934
Betaproteobacteria
TTG
Gln
>WENV181307856
OFIS01000006
148851
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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