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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182574449
OJFR01024299
147023
Gammaproteobacteria
CAT
Met
>WENV182574078
OJFR01000002
235887
Gammaproteobacteria
GTG
His
>WENV182574304
OJFR01003111
237766
Gammaproteobacteria
TAC
Val
>WENV182574234
OJFR01001043
279385
Gammaproteobacteria
TTT
Lys
>WENV182574244
OJFR01001174
279385
Gammaproteobacteria
TTT
Lys
>WENV182574331
OJFR01004967
149035
Gammaproteobacteria
CCG
Arg
>WENV182574089
OJFR01000007
145368
Gammaproteobacteria
CCT
Arg
>WENV182574165
OJFR01000324
145368
Gammaproteobacteria
CCT
Arg
>WENV182574229
OJFR01000966
58822
Gammaproteobacteria
CAA
Leu
>WENV182574384
OJFR01008913
145260
Gammaproteobacteria
CAT
Met
>WENV182574370
OJFR01007771
160030
Gammaproteobacteria
GGG
Pro
>WENV182574439
OJFR01020952
45109
Gammaproteobacteria
GGA
Ser
>WENV182574090
OJFR01000007
145367
Gammaproteobacteria
GGG
Pro
>WENV182574156
OJFR01000230
145367
Gammaproteobacteria
GGG
Pro
>WENV182574151
OJFR01000176
145196
Gammaproteobacteria
CAT
Met
>WENV182574152
OJFR01000195
163940
Gammaproteobacteria
CCG
Arg
>WENV182574238
OJFR01001049
269265
Gammaproteobacteria
GGT
Thr
>WENV182574324
OJFR01004812
235452
Gammaproteobacteria
GAA
Phe
>WENV182574247
OJFR01001281
240619
Gammaproteobacteria
TGT
Thr
>WENV182574237
OJFR01001049
338534
Gammaproteobacteria
TCC
Gly
>WENV182574473
OJFR01034909
145261
Gammaproteobacteria
CAT
Met
>WENV182574087
OJFR01000005
145366
Gammaproteobacteria
ACG
Arg
>WENV182574088
OJFR01000005
145366
Gammaproteobacteria
ACG
Arg
>WENV182574278
OJFR01001778
145366
Gammaproteobacteria
ACG
Arg
>WENV182574080
OJFR01000003
16284
Gammaproteobacteria
TGA
Ser
>WENV182574172
OJFR01000372
16284
Gammaproteobacteria
TGA
Ser
>WENV182574082
OJFR01000004
145369
Gammaproteobacteria
CGG
Pro
>WENV182574125
OJFR01000087
145369
Gammaproteobacteria
CGG
Pro
>WENV182574263
OJFR01001495
174801
Gammaproteobacteria
TGG
Pro
>WENV182574202
OJFR01000686
45345
Gammaproteobacteria
GGA
Ser
>WENV182574105
OJFR01000045
185155
Gammaproteobacteria
CAT
Met
>WENV182574096
OJFR01000020
98737
Gammaproteobacteria
GAG
Leu
>WENV182574429
OJFR01018926
340801
Gammaproteobacteria
CCT
Arg
>WENV182574236
OJFR01001049
95983
Gammaproteobacteria
>WENV182574262
OJFR01001491
277901
Gammaproteobacteria
TGT
Thr
>WENV182574406
OJFR01013006
149038
Gammaproteobacteria
TGG
Pro
>WENV182574457
OJFR01028942
278046
Gammaproteobacteria
TGT
Thr
>WENV182574391
OJFR01009372
279906
Gammaproteobacteria
TGC
Ala
>WENV182574404
OJFR01012614
162437
Gammaproteobacteria
TCT
Arg
>WENV182574240
OJFR01001080
145365
Gammaproteobacteria
GAC
Val
>WENV182574289
OJFR01002454
145365
Gammaproteobacteria
GAC
Val
>WENV182574356
OJFR01006161
148452
Gammaproteobacteria
CCT
Arg
>WENV182574195
OJFR01000527
241136
Gammaproteobacteria
TTG
Gln
>WENV182574178
OJFR01000464
341850
Gammaproteobacteria
TTG
Gln
>WENV182574075
OJFR01000002
235886
Gammaproteobacteria
TTC
Glu
>WENV182574130
OJFR01000095
235886
Gammaproteobacteria
TTC
Glu
>WENV182574380
OJFR01008742
235886
Gammaproteobacteria
TTC
Glu
>WENV182574320
OJFR01004563
151889
Gammaproteobacteria
CAT
Met
>WENV182574076
OJFR01000002
186449
Gammaproteobacteria
TGG
Pro
>WENV182574157
OJFR01000237
243921
Gammaproteobacteria
TTT
Lys
>WENV182574413
OJFR01014351
262546
Gammaproteobacteria
TGC
Ala
>WENV182574423
OJFR01017267
262546
Gammaproteobacteria
TGC
Ala
>WENV182574364
OJFR01006860
59658
Gammaproteobacteria
CAA
Leu
>WENV182574350
OJFR01005485
149661
Gammaproteobacteria
CAT
Met
>WENV182574097
OJFR01000025
182592
Gammaproteobacteria
GAC
Val
>WENV182574100
OJFR01000031
411735
Gammaproteobacteria
GCA
Cys
>WENV182574267
OJFR01001498
411735
Gammaproteobacteria
GCA
Cys
>WENV182574309
OJFR01003176
411735
Gammaproteobacteria
GCA
Cys
>WENV182574318
OJFR01004372
175964
Gammaproteobacteria
CAT
Met
>WENV182574293
OJFR01002623
150648
Gammaproteobacteria
TGG
Pro
>WENV182574124
OJFR01000086
277196
Gammaproteobacteria
GAA
Phe
>WENV182574176
OJFR01000435
10850
Gammaproteobacteria
TGA
Ser
>WENV182574177
OJFR01000435
10850
Gammaproteobacteria
TGA
Ser
>WENV182574201
OJFR01000686
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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