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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728188
PJTP01059952
238673
Bacteroidota
GAA
Phe
>WENV183728189
PJTP01059952
238673
Bacteroidota
GAA
Phe
>WENV183727659
PJTP01000066
165001
Bacteroidota
GTT
Asn
>WENV183727990
PJTP01012654
165001
Bacteroidota
GTT
Asn
>WENV183727775
PJTP01000190
412419
Bacteroidota
CCA
Trp
>WENV183727625
PJTP01000046
147867
Bacteroidota
GTG
His
>WENV183728176
PJTP01055466
147867
Bacteroidota
GTG
His
>WENV183727639
PJTP01000055
145315
Bacteroidota
CAT
Met
>WENV183727712
PJTP01000097
147864
Bacteroidota
TGG
Pro
>WENV183727713
PJTP01000097
147864
Bacteroidota
TGG
Pro
>WENV183727714
PJTP01000097
147864
Bacteroidota
TGG
Pro
>WENV183727627
PJTP01000046
45276
Bacteroidota
TGA
Ser
>WENV183727684
PJTP01000089
45276
Bacteroidota
TGA
Ser
>WENV183727735
PJTP01000127
45276
Bacteroidota
TGA
Ser
>WENV183727847
PJTP01001206
45276
Bacteroidota
TGA
Ser
>WENV183727848
PJTP01001206
45276
Bacteroidota
TGA
Ser
>WENV183728113
PJTP01037093
45276
Bacteroidota
TGA
Ser
>WENV183727779
PJTP01000219
119517
Bacteroidota
CAA
Leu
>WENV183727786
PJTP01000295
119517
Bacteroidota
CAA
Leu
>WENV183728080
PJTP01028843
238872
Bacteroidota
TTT
Lys
>WENV183727533
PJTP01000012
235817
Bacteroidota
GAA
Phe
>WENV183727523
PJTP01000010
59351
Bacteroidota
GAG
Leu
>WENV183727607
PJTP01000029
127221
Bacteroidota
TAC
Val
>WENV183728090
PJTP01031772
127221
Bacteroidota
TAC
Val
>WENV183728158
PJTP01051470
127221
Bacteroidota
TAC
Val
>WENV183728054
PJTP01025031
268513
Bacteroidota
TCC
Gly
>WENV183727773
PJTP01000190
267805
Bacteroidota
TCC
Gly
>WENV183727726
PJTP01000107
168744
Bacteroidota
GTG
His
>WENV183727727
PJTP01000107
168744
Bacteroidota
GTG
His
>WENV183728056
PJTP01025031
113760
Bacteroidota
GTA
Tyr
>WENV183727992
PJTP01012862
162423
Bacteroidota
TTT
Lys
>WENV183727902
PJTP01004686
119530
Bacteroidota
CAA
Leu
>WENV183727604
PJTP01000029
411771
Bacteroidota
TTG
Gln
>WENV183727605
PJTP01000029
411771
Bacteroidota
TTG
Gln
>WENV183727676
PJTP01000082
127215
Bacteroidota
TAC
Val
>WENV183727678
PJTP01000082
127215
Bacteroidota
TAC
Val
>WENV183727656
PJTP01000065
238600
Bacteroidota
CAT
Met
>WENV183727657
PJTP01000065
238600
Bacteroidota
CAT
Met
>WENV183727746
PJTP01000144
238600
Bacteroidota
CAT
Met
>WENV183727774
PJTP01000190
342824
Bacteroidota
GGT
Thr
>WENV183728065
PJTP01026575
412441
Bacteroidota
TTG
Gln
>WENV183728082
PJTP01029056
412441
Bacteroidota
TTG
Gln
>WENV183727571
PJTP01000020
360086
Bacteroidota
TTC
Glu
>WENV183727572
PJTP01000020
360086
Bacteroidota
TTC
Glu
>WENV183727725
PJTP01000104
360086
Bacteroidota
TTC
Glu
>WENV183727967
PJTP01010537
360086
Bacteroidota
TTC
Glu
>WENV183727677
PJTP01000082
126680
Bacteroidota
TAC
Val
>WENV183727709
PJTP01000097
411719
Bacteroidota
GCA
Cys
>WENV183728008
PJTP01015852
25256
Bacteroidota
GCT
Ser
>WENV183727660
PJTP01000066
238756
Bacteroidota
CAT
Met
>WENV183727661
PJTP01000066
238756
Bacteroidota
CAT
Met
>WENV183727535
PJTP01000012
235822
Bacteroidota
TGT
Thr
>WENV183727536
PJTP01000012
235822
Bacteroidota
TGT
Thr
>WENV183727537
PJTP01000012
235822
Bacteroidota
TGT
Thr
>WENV183727771
PJTP01000190
235822
Bacteroidota
TGT
Thr
>WENV183728147
PJTP01046569
48896
Bacteroidota
>WENV183727710
PJTP01000097
147863
Bacteroidota
CAT
Met
>WENV183727711
PJTP01000097
147863
Bacteroidota
CAT
Met
>WENV183728098
PJTP01033437
147863
Bacteroidota
CAT
Met
>WENV183728099
PJTP01033437
147863
Bacteroidota
CAT
Met
>WENV183728177
PJTP01056439
147863
Bacteroidota
CAT
Met
>WENV183727562
PJTP01000018
150454
Bacteroidota
TGT
Thr
>WENV183727633
PJTP01000054
150454
Bacteroidota
TGT
Thr
>WENV183727635
PJTP01000054
150454
Bacteroidota
TGT
Thr
>WENV183727762
PJTP01000168
145507
Bacteroidota
TCT
Arg
>WENV183728171
PJTP01054044
145507
Bacteroidota
TCT
Arg
>WENV183727733
PJTP01000127
44923
Bacteroidota
TAA
Leu
>WENV183727767
PJTP01000177
44923
Bacteroidota
TAA
Leu
>WENV183727975
PJTP01011516
44923
Bacteroidota
TAA
Leu
>WENV183727591
PJTP01000027
48382
Bacteroidota
TGA
Ser
>WENV183727638
PJTP01000054
48382
Bacteroidota
TGA
Ser
>WENV183727724
PJTP01000103
48382
Bacteroidota
TGA
Ser
>WENV183727791
PJTP01000368
48382
Bacteroidota
TGA
Ser
>WENV183727613
PJTP01000039
236053
Bacteroidota
TTT
Lys
>WENV183727615
PJTP01000039
236053
Bacteroidota
TTT
Lys
>WENV183727616
PJTP01000039
236053
Bacteroidota
TTT
Lys
>WENV183728016
PJTP01017300
237427
Bacteroidota
TGT
Thr
>WENV183727623
PJTP01000045
179613
Bacteroidota
CAT
Met
>WENV183727531
PJTP01000012
256304
Bacteroidota
TTT
Lys
>WENV183727609
PJTP01000031
256304
Bacteroidota
TTT
Lys
>WENV183727622
PJTP01000044
256304
Bacteroidota
TTT
Lys
>WENV183727734
PJTP01000127
256304
Bacteroidota
TTT
Lys
>WENV183728116
PJTP01037739
256304
Bacteroidota
TTT
Lys
>WENV183728055
PJTP01025031
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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