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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745602
POVV01000152
37213
Bacillota
TGA
Ser
>WENV183745838
POVV01001212
37213
Bacillota
TGA
Ser
>WENV183746396
POVV01039306
37213
Bacillota
TGA
Ser
>WENV183746058
POVV01005687
154063
Bacillota
CGG
Pro
>WENV183746098
POVV01007936
154063
Bacillota
CGG
Pro
>WENV183746254
POVV01019005
150557
Bacillota
ACG
Arg
>WENV183745476
POVV01000031
267556
Bacillota
TAC
Val
>WENV183745537
POVV01000071
267556
Bacillota
TAC
Val
>WENV183745621
POVV01000164
267556
Bacillota
TAC
Val
>WENV183746124
POVV01009476
267556
Bacillota
TAC
Val
>WENV183746187
POVV01012709
267556
Bacillota
TAC
Val
>WENV183746258
POVV01020296
267556
Bacillota
TAC
Val
>WENV183746353
POVV01031222
267556
Bacillota
TAC
Val
>WENV183745639
POVV01000190
246392
Bacillota
GTT
Asn
>WENV183745792
POVV01000779
339890
Bacillota
TTG
Gln
>WENV183745485
POVV01000033
338152
Bacillota
TTC
Glu
>WENV183745523
POVV01000059
338152
Bacillota
TTC
Glu
>WENV183745494
POVV01000033
148239
Bacillota
TCT
Arg
>WENV183745955
POVV01002411
369244
Bacillota
TTC
Glu
>WENV183746081
POVV01007349
369244
Bacillota
TTC
Glu
>WENV183746207
POVV01014460
369244
Bacillota
TTC
Glu
>WENV183746026
POVV01004207
282052
Bacillota
TTT
Lys
>WENV183746149
POVV01010350
282052
Bacillota
TTT
Lys
>WENV183746175
POVV01012035
282052
Bacillota
TTT
Lys
>WENV183746165
POVV01011846
245370
Bacillota
TGT
Thr
>WENV183745774
POVV01000726
145118
Bacillota
ACG
Arg
>WENV183745805
POVV01000929
145118
Bacillota
ACG
Arg
>WENV183745899
POVV01001690
145118
Bacillota
ACG
Arg
>WENV183746022
POVV01004083
145118
Bacillota
ACG
Arg
>WENV183746070
POVV01006343
145118
Bacillota
ACG
Arg
>WENV183746164
POVV01011846
145118
Bacillota
ACG
Arg
>WENV183746303
POVV01025927
145118
Bacillota
ACG
Arg
>WENV183746229
POVV01016453
235137
Bacillota
TGC
Ala
>WENV183746302
POVV01025580
235137
Bacillota
TGC
Ala
>WENV183745475
POVV01000031
144668
Bacillota
GTC
Asp
>WENV183745620
POVV01000164
144668
Bacillota
GTC
Asp
>WENV183746080
POVV01007349
369245
Bacillota
GTT
Asn
>WENV183745836
POVV01001205
243646
Bacillota
GTT
Asn
>WENV183745956
POVV01002443
243646
Bacillota
GTT
Asn
>WENV183746012
POVV01003838
243646
Bacillota
GTT
Asn
>WENV183746160
POVV01011846
243646
Bacillota
GTT
Asn
>WENV183746211
POVV01014773
243646
Bacillota
GTT
Asn
>WENV183746216
POVV01015362
243646
Bacillota
GTT
Asn
>WENV183746269
POVV01021685
243646
Bacillota
GTT
Asn
>WENV183746282
POVV01022161
243646
Bacillota
GTT
Asn
>WENV183746393
POVV01038044
243646
Bacillota
GTT
Asn
>WENV183746123
POVV01009476
149041
Bacillota
GTC
Asp
>WENV183746186
POVV01012709
149041
Bacillota
GTC
Asp
>WENV183745916
POVV01001868
147185
Bacillota
CCT
Arg
>WENV183746357
POVV01031397
338439
Bacillota
GCC
Gly
>WENV183745608
POVV01000156
338439
Bacillota
GCC
Gly
>WENV183745612
POVV01000156
338439
Bacillota
GCC
Gly
>WENV183745886
POVV01001565
338439
Bacillota
GCC
Gly
>WENV183745927
POVV01002050
338439
Bacillota
GCC
Gly
>WENV183745971
POVV01002776
338439
Bacillota
GCC
Gly
>WENV183745991
POVV01003096
338439
Bacillota
GCC
Gly
>WENV183746241
POVV01017746
338439
Bacillota
GCC
Gly
>WENV183745810
POVV01000973
153041
Bacillota
GGG
Pro
>WENV183745912
POVV01001838
153041
Bacillota
GGG
Pro
>WENV183746097
POVV01007914
153041
Bacillota
GGG
Pro
>WENV183746341
POVV01030242
413152
Bacillota
TCC
Gly
>WENV183745842
POVV01001284
148268
Bacillota
CGG
Pro
>WENV183745495
POVV01000033
144610
Bacillota
GTG
His
>WENV183745839
POVV01001212
10680
Bacillota
GGA
Ser
>WENV183746397
POVV01039306
10680
Bacillota
GGA
Ser
>WENV183746361
POVV01032571
18852
Bacillota
GCT
Ser
>WENV183746048
POVV01004959
241471
Bacillota
TGC
Ala
>WENV183746274
POVV01021735
241471
Bacillota
TGC
Ala
>WENV183745830
POVV01001103
185292
Bacillota
ACG
Arg
>WENV183746103
POVV01007976
185292
Bacillota
ACG
Arg
>WENV183746189
POVV01012709
185292
Bacillota
ACG
Arg
>WENV183746260
POVV01020296
185292
Bacillota
ACG
Arg
>WENV183746083
POVV01007349
154748
Bacillota
GTC
Asp
>WENV183745894
POVV01001664
59296
Bacillota
AAG
Leu
>WENV183745977
POVV01002899
59296
Bacillota
AAG
Leu
>WENV183746005
POVV01003551
59296
Bacillota
AAG
Leu
>WENV183745582
POVV01000103
237846
Bacillota
GCC
Gly
>WENV183745712
POVV01000413
237846
Bacillota
GCC
Gly
>WENV183745787
POVV01000779
237846
Bacillota
GCC
Gly
>WENV183745851
POVV01001355
237846
Bacillota
GCC
Gly
>WENV183745863
POVV01001463
237846
Bacillota
GCC
Gly
>WENV183745931
POVV01002068
237846
Bacillota
GCC
Gly
>WENV183746105
POVV01007977
237846
Bacillota
GCC
Gly
>WENV183746122
POVV01009292
237846
Bacillota
GCC
Gly
>WENV183746202
POVV01013900
237846
Bacillota
GCC
Gly
>WENV183746371
POVV01034025
237846
Bacillota
GCC
Gly
>WENV183745481
POVV01000031
235127
Bacillota
TTT
Lys
>WENV183745741
POVV01000503
235127
Bacillota
TTT
Lys
>WENV183745738
POVV01000503
147674
Bacillota
TCT
Arg
>WENV183746348
POVV01031154
254433
Bacillota
TAC
Val
>WENV183745848
POVV01001318
235291
Bacillota
TTT
Lys
>WENV183745940
POVV01002229
235291
Bacillota
TTT
Lys
>WENV183745986
POVV01003096
235291
Bacillota
TTT
Lys
>WENV183746157
POVV01011580
235291
Bacillota
TTT
Lys
>WENV183745708
POVV01000413
144672
Bacillota
TCT
Arg
>WENV183745790
POVV01000779
144672
Bacillota
TCT
Arg
>WENV183745827
POVV01001090
338491
Bacillota
CAT
Met
>WENV183746212
POVV01014773
338491
Bacillota
CAT
Met
>WENV183746270
POVV01021685
338491
Bacillota
CAT
Met
>WENV183746000
POVV01003378
273029
Bacillota
TGT
Thr
>WENV183745767
POVV01000702
281472
Bacillota
GGT
Thr
>WENV183745784
POVV01000751
281472
Bacillota
GGT
Thr
>WENV183745904
POVV01001708
281472
Bacillota
GGT
Thr
>WENV183746003
POVV01003378
281472
Bacillota
GGT
Thr
>WENV183745480
POVV01000031
272488
Bacillota
GAA
Phe
>WENV183745505
POVV01000037
272488
Bacillota
GAA
Phe
>WENV183745592
POVV01000116
272488
Bacillota
GAA
Phe
>WENV183745941
POVV01002229
339659
Bacillota
TTC
Glu
>WENV183746085
POVV01007349
241472
Bacillota
CCA
Trp
>WENV183745609
POVV01000156
235696
Bacillota
CCA
Trp
>WENV183745928
POVV01002050
235696
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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