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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100413
AERA01003652
188716
Betaproteobacteria
ACG
Arg
>WENV170000055
AERA01003652
188716
Betaproteobacteria
ACG
Arg
>WENV11100425
AERA01005011
178981
Betaproteobacteria
CAT
Met
>WENV170000067
AERA01005011
178981
Betaproteobacteria
CAT
Met
>WENV11100585
AERA01027920
481172
Betaproteobacteria
GCA
Cys
>WENV170000227
AERA01027920
481172
Betaproteobacteria
GCA
Cys
>WENV11100584
AERA01027920
282645
Betaproteobacteria
GCC
Gly
>WENV11100602
AERA01033801
282645
Betaproteobacteria
GCC
Gly
>WENV11100611
AERA01035217
282645
Betaproteobacteria
GCC
Gly
>WENV170000226
AERA01027920
282645
Betaproteobacteria
GCC
Gly
>WENV170000244
AERA01033801
282645
Betaproteobacteria
GCC
Gly
>WENV170000253
AERA01035217
282645
Betaproteobacteria
GCC
Gly
>WENV11100555
AERA01022797
400624
Betaproteobacteria
GGT
Thr
>WENV170000197
AERA01022797
400624
Betaproteobacteria
GGT
Thr
>WENV11100507
AERA01017287
117806
Betaproteobacteria
GTA
Tyr
>WENV170000149
AERA01017287
117806
Betaproteobacteria
GTA
Tyr
>WENV11100542
AERA01020916
118309
Betaproteobacteria
TAG
Leu
>WENV170000184
AERA01020916
118309
Betaproteobacteria
TAG
Leu
>WENV11100558
AERA01023750
178984
Betaproteobacteria
TCT
Arg
>WENV170000200
AERA01023750
178984
Betaproteobacteria
TCT
Arg
>WENV170000258
AERA01035706
283781
Betaproteobacteria
TGC
Ala
>WENV11100514
AERA01018188
283781
Betaproteobacteria
TGC
Ala
>WENV11100616
AERA01035706
283781
Betaproteobacteria
TGC
Ala
>WENV170000156
AERA01018188
283781
Betaproteobacteria
TGC
Ala
>WENV170000148
AERA01017287
292271
Betaproteobacteria
TGT
Thr
>WENV11100506
AERA01017287
292271
Betaproteobacteria
TGT
Thr
>WENV11100532
AERA01019508
178982
Betaproteobacteria
TTG
Gln
>WENV170000174
AERA01019508
178982
Betaproteobacteria
TTG
Gln
>WENV11100465
AERA01011535
199655
Betaproteobacteria
TTG
Gln
>WENV170000107
AERA01011535
199655
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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