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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082790
BAAW01001013
281299
Bacillota
TTT
Lys
>WENV082920
BAAW01012386
281299
Bacillota
TTT
Lys
>WENV082812
BAAW01001652
280870
Bacillota
TGC
Ala
>WENV082815
BAAW01001776
280870
Bacillota
TGC
Ala
>WENV082792
BAAW01001013
487828
Bacillota
TCC
Gly
>WENV082787
BAAW01001013
176679
Bacillota
TCT
Arg
>WENV082814
BAAW01001760
399271
Bacillota
CCT
Arg
>WENV082791
BAAW01001013
400719
Bacillota
GCC
Gly
>WENV082788
BAAW01001013
330433
Bacillota
GTG
His
>WENV082914
BAAW01012237
399041
Bacillota
CCA
Trp
>WENV082874
BAAW01008828
399041
Bacillota
CCA
Trp
>WENV082880
BAAW01009476
281300
Bacillota
GAA
Phe
>WENV082968
BAAW01016331
303839
Bacillota
GGT
Thr
>WENV082825
BAAW01002289
368693
Bacillota
TAC
Val
>WENV082824
BAAW01002289
399260
Bacillota
TGT
Thr
>WENV082789
BAAW01001013
399264
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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