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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170266172
CERE01046050
140876
Alphaproteobacteria
>WENV170265998
CERE01029354
305403
Alphaproteobacteria
>WENV170266262
CERE01055073
140932
Alphaproteobacteria
>WENV170266076
CERE01037653
179724
Alphaproteobacteria
ACG
Arg
>WENV170266341
CERE01059523
140893
Alphaproteobacteria
CAA
Leu
>WENV170266022
CERE01031984
100184
Alphaproteobacteria
CAG
Leu
>WENV170266111
CERE01040972
180029
Alphaproteobacteria
CAT
Met
>WENV170265930
CERE01024401
176153
Alphaproteobacteria
CAT
Met
>WENV170266896
CERE01137853
176490
Alphaproteobacteria
CAT
Met
>WENV170266927
CERE01148350
325687
Alphaproteobacteria
CCA
Trp
>WENV170266762
CERE01106906
481096
Alphaproteobacteria
CCC
Gly
>WENV170266897
CERE01138346
193463
Alphaproteobacteria
CCT
Arg
>WENV170266510
CERE01080303
178509
Alphaproteobacteria
CCT
Arg
>WENV170266210
CERE01050434
29727
Alphaproteobacteria
CGA
Ser
>WENV170266222
CERE01051779
210530
Alphaproteobacteria
CGG
Pro
>WENV170265982
CERE01028306
210530
Alphaproteobacteria
CGG
Pro
>WENV170266661
CERE01098505
178728
Alphaproteobacteria
CGG
Pro
>WENV170266180
CERE01047138
283601
Alphaproteobacteria
CGT
Thr
>WENV170266628
CERE01095138
399480
Alphaproteobacteria
GAA
Phe
>WENV170266688
CERE01100516
399001
Alphaproteobacteria
GAC
Val
>WENV170266983
CERE01167177
400848
Alphaproteobacteria
GAC
Val
>WENV170267059
CERE01184630
400515
Alphaproteobacteria
GAC
Val
>WENV170266019
CERE01031357
100185
Alphaproteobacteria
GAG
Leu
>WENV170266616
CERE01093141
75222
Alphaproteobacteria
GAG
Leu
>WENV170266148
CERE01044017
481326
Alphaproteobacteria
GCA
Cys
>WENV170265949
CERE01026154
427571
Alphaproteobacteria
GCC
Gly
>WENV170266674
CERE01099589
398996
Alphaproteobacteria
GCC
Gly
>WENV170266198
CERE01048903
29729
Alphaproteobacteria
GCT
Ser
>WENV170266352
CERE01060071
29495
Alphaproteobacteria
GCT
Ser
>WENV170265682
CERE01006089
29841
Alphaproteobacteria
GGA
Ser
>WENV170266780
CERE01107120
29841
Alphaproteobacteria
GGA
Ser
>WENV170266708
CERE01103169
404592
Alphaproteobacteria
GGT
Thr
>WENV170265861
CERE01020105
400387
Alphaproteobacteria
GGT
Thr
>WENV170266992
CERE01170881
178725
Alphaproteobacteria
GTG
His
>WENV170266351
CERE01060018
398994
Alphaproteobacteria
GTT
Asn
>WENV170265629
CERE01000286
281676
Alphaproteobacteria
TAC
Val
>WENV170266554
CERE01086278
289671
Alphaproteobacteria
TAC
Val
>WENV170266398
CERE01065345
118213
Alphaproteobacteria
TAG
Leu
>WENV170266832
CERE01114688
118150
Alphaproteobacteria
TAG
Leu
>WENV170266188
CERE01047683
482973
Alphaproteobacteria
TCC
Gly
>WENV170267061
CERE01184952
487436
Alphaproteobacteria
TCC
Gly
>WENV170265974
CERE01027096
190609
Alphaproteobacteria
TCT
Arg
>WENV170266619
CERE01094310
32370
Alphaproteobacteria
TGA
Ser
>WENV170266476
CERE01075375
190614
Alphaproteobacteria
TGG
Pro
>WENV170266134
CERE01042820
176225
Alphaproteobacteria
TGG
Pro
>WENV170266073
CERE01037184
399000
Alphaproteobacteria
TTC
Glu
>WENV170266553
CERE01086250
401037
Alphaproteobacteria
TTG
Gln
>WENV170266630
CERE01095229
400514
Alphaproteobacteria
TTG
Gln
>WENV170266794
CERE01107806
283510
Alphaproteobacteria
TTT
Lys
>WENV170266221
CERE01051779
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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