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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170305343
CESI01137907
184784
Gammaproteobacteria
TGG
Pro
>WENV170304773
CESI01076514
297858
Gammaproteobacteria
TGC
Ala
>WENV170305681
CESI01161927
283221
Gammaproteobacteria
GCC
Gly
>WENV170304605
CESI01061094
287037
Gammaproteobacteria
GTG
His
>WENV170304555
CESI01054707
20618
Gammaproteobacteria
GGA
Ser
>WENV170304151
CESI01023367
284022
Gammaproteobacteria
TGT
Thr
>WENV170304197
CESI01025907
284022
Gammaproteobacteria
TGT
Thr
>WENV170305314
CESI01135383
287057
Gammaproteobacteria
GAA
Phe
>WENV170304548
CESI01054165
185999
Gammaproteobacteria
CCG
Arg
>WENV170305222
CESI01126566
401883
Gammaproteobacteria
TTG
Gln
>WENV170304198
CESI01025907
118078
Gammaproteobacteria
GTA
Tyr
>WENV170304352
CESI01036789
74240
Gammaproteobacteria
CAA
Leu
>WENV170304736
CESI01073742
178006
Gammaproteobacteria
GGG
Pro
>WENV170304029
CESI01013182
13452
Gammaproteobacteria
GCT
Ser
>WENV170305682
CESI01161927
481023
Gammaproteobacteria
GCA
Cys
>WENV170304155
CESI01023635
402281
Gammaproteobacteria
GCC
Gly
>WENV170304232
CESI01028594
176545
Gammaproteobacteria
CAT
Met
>WENV170304859
CESI01085020
118920
Gammaproteobacteria
TAG
Leu
>WENV170304153
CESI01023423
118920
Gammaproteobacteria
TAG
Leu
>WENV170305691
CESI01165498
118204
Gammaproteobacteria
CAA
Leu
>WENV170305697
CESI01171240
180998
Gammaproteobacteria
GAC
Val
>WENV170305053
CESI01107410
401684
Gammaproteobacteria
CCT
Arg
>WENV170305683
CESI01161927
73481
Gammaproteobacteria
TAA
Leu
>WENV170304001
CESI01010992
284865
Gammaproteobacteria
>WENV170305220
CESI01126566
180718
Gammaproteobacteria
CAT
Met
>WENV170305249
CESI01129849
481678
Gammaproteobacteria
GCA
Cys
>WENV170305243
CESI01129119
177028
Gammaproteobacteria
CAT
Met
>WENV170305250
CESI01129849
73504
Gammaproteobacteria
TAA
Leu
>WENV170304772
CESI01076514
176301
Gammaproteobacteria
GAT
Ile
>WENV170304438
CESI01044153
180678
Gammaproteobacteria
CCG
Arg
>WENV170304582
CESI01057850
285547
Gammaproteobacteria
TTG
Gln
>WENV170304834
CESI01083179
282689
Gammaproteobacteria
GAA
Phe
>WENV170304405
CESI01041785
281939
Gammaproteobacteria
TTT
Lys
>WENV170304265
CESI01031546
282902
Gammaproteobacteria
TGT
Thr
>WENV170304201
CESI01026087
180679
Gammaproteobacteria
CCA
Trp
>WENV170305021
CESI01102211
283486
Gammaproteobacteria
TGT
Thr
>WENV170304003
CESI01011033
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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