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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170356398
CETJ01028269
210406
Gammaproteobacteria
ACG
Arg
>WENV170356399
CETJ01028269
210406
Gammaproteobacteria
ACG
Arg
>WENV170356153
CETJ01008769
186591
Gammaproteobacteria
ACG
Arg
>WENV170356154
CETJ01008769
186591
Gammaproteobacteria
ACG
Arg
>WENV170356485
CETJ01037086
74048
Gammaproteobacteria
CAA
Leu
>WENV170356701
CETJ01059531
197233
Gammaproteobacteria
CAT
Met
>WENV170357239
CETJ01136528
184459
Gammaproteobacteria
CAT
Met
>WENV170356361
CETJ01025375
179613
Gammaproteobacteria
CAT
Met
>WENV170356980
CETJ01087013
353123
Gammaproteobacteria
CCA
Trp
>WENV170356311
CETJ01020652
180679
Gammaproteobacteria
CCA
Trp
>WENV170356265
CETJ01016792
180679
Gammaproteobacteria
CCA
Trp
>WENV170357368
CETJ01173737
220813
Gammaproteobacteria
CCG
Arg
>WENV170356509
CETJ01040247
178532
Gammaproteobacteria
CCG
Arg
>WENV170356944
CETJ01084330
399050
Gammaproteobacteria
CCT
Arg
>WENV170357216
CETJ01128176
178535
Gammaproteobacteria
CCT
Arg
>WENV170357434
CETJ01187375
283966
Gammaproteobacteria
CCT
Arg
>WENV170356082
CETJ01004494
401684
Gammaproteobacteria
CCT
Arg
>WENV170357288
CETJ01151399
178541
Gammaproteobacteria
CGG
Pro
>WENV170357304
CETJ01155977
176241
Gammaproteobacteria
CGG
Pro
>WENV170356074
CETJ01003795
289658
Gammaproteobacteria
CGT
Thr
>WENV170356136
CETJ01007404
178539
Gammaproteobacteria
GAC
Val
>WENV170357131
CETJ01096667
178169
Gammaproteobacteria
GAC
Val
>WENV170356863
CETJ01074306
73501
Gammaproteobacteria
GAG
Leu
>WENV170356506
CETJ01040062
178164
Gammaproteobacteria
GAT
Ile
>WENV170356845
CETJ01071997
481678
Gammaproteobacteria
GCA
Cys
>WENV170356807
CETJ01068386
481314
Gammaproteobacteria
GCA
Cys
>WENV170356461
CETJ01034255
8667
Gammaproteobacteria
GCT
Ser
>WENV170357209
CETJ01125565
29419
Gammaproteobacteria
GGA
Ser
>WENV170356794
CETJ01067633
20618
Gammaproteobacteria
GGA
Ser
>WENV170357078
CETJ01094985
30633
Gammaproteobacteria
GGA
Ser
>WENV170357378
CETJ01176471
56340
Gammaproteobacteria
GGA
Ser
>WENV170356038
CETJ01000520
349758
Gammaproteobacteria
GGC
Ala
>WENV170357349
CETJ01168299
178533
Gammaproteobacteria
GGG
Pro
>WENV170356302
CETJ01019937
292194
Gammaproteobacteria
GGT
Thr
>WENV170356658
CETJ01055976
443066
Gammaproteobacteria
GGT
Thr
>WENV170356879
CETJ01075737
296672
Gammaproteobacteria
GGT
Thr
>WENV170356877
CETJ01075737
141076
Gammaproteobacteria
GTA
Tyr
>WENV170356656
CETJ01055976
140861
Gammaproteobacteria
GTA
Tyr
>WENV170356816
CETJ01069299
158246
Gammaproteobacteria
GTC
Asp
>WENV170356138
CETJ01007601
178538
Gammaproteobacteria
GTC
Asp
>WENV170356490
CETJ01038106
286691
Gammaproteobacteria
GTG
His
>WENV170356521
CETJ01042087
318157
Gammaproteobacteria
GTT
Asn
>WENV170356414
CETJ01029140
299227
Gammaproteobacteria
GTT
Asn
>WENV170356765
CETJ01064194
299227
Gammaproteobacteria
GTT
Asn
>WENV170357139
CETJ01096924
74826
Gammaproteobacteria
TAA
Leu
>WENV170356834
CETJ01071002
73063
Gammaproteobacteria
TAA
Leu
>WENV170356270
CETJ01017064
118413
Gammaproteobacteria
TAG
Leu
>WENV170357419
CETJ01184175
118414
Gammaproteobacteria
TAG
Leu
>WENV170357109
CETJ01095833
30632
Gammaproteobacteria
TGA
Ser
>WENV170356927
CETJ01082342
178540
Gammaproteobacteria
TGG
Pro
>WENV170356214
CETJ01013019
201377
Gammaproteobacteria
TGG
Pro
>WENV170357069
CETJ01094537
334421
Gammaproteobacteria
TGT
Thr
>WENV170357010
CETJ01089631
315775
Gammaproteobacteria
TGT
Thr
>WENV170357144
CETJ01096973
315775
Gammaproteobacteria
TGT
Thr
>WENV170356957
CETJ01085565
444310
Gammaproteobacteria
TTG
Gln
>WENV170356615
CETJ01051640
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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