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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170371534
CETS01018238
296698
Alphaproteobacteria
CGC
Ala
>WENV170372143
CETS01068008
296698
Alphaproteobacteria
CGC
Ala
>WENV170372634
CETS01117720
296698
Alphaproteobacteria
CGC
Ala
>WENV170372918
CETS01147481
296698
Alphaproteobacteria
CGC
Ala
>WENV170372345
CETS01086676
282745
Alphaproteobacteria
TAC
Val
>WENV170372666
CETS01121909
282745
Alphaproteobacteria
TAC
Val
>WENV170372387
CETS01090872
481048
Alphaproteobacteria
GCA
Cys
>WENV170371602
CETS01023643
207217
Alphaproteobacteria
CCG
Arg
>WENV170372950
CETS01149860
176225
Alphaproteobacteria
TGG
Pro
>WENV170372402
CETS01092114
401056
Alphaproteobacteria
TTC
Glu
>WENV170372403
CETS01092114
401056
Alphaproteobacteria
TTC
Glu
>WENV170372092
CETS01063561
140876
Alphaproteobacteria
>WENV170372744
CETS01130204
289412
Alphaproteobacteria
CCA
Trp
>WENV170372286
CETS01080010
193463
Alphaproteobacteria
CCT
Arg
>WENV170372406
CETS01092361
201940
Alphaproteobacteria
CAT
Met
>WENV170372069
CETS01062253
201940
Alphaproteobacteria
CAT
Met
>WENV170371311
CETS01002223
201940
Alphaproteobacteria
CAT
Met
>WENV170373324
CETS01250684
481802
Alphaproteobacteria
TCC
Gly
>WENV170371302
CETS01001411
400518
Alphaproteobacteria
GAA
Phe
>WENV170372006
CETS01057310
400518
Alphaproteobacteria
GAA
Phe
>WENV170372915
CETS01147060
400518
Alphaproteobacteria
GAA
Phe
>WENV170371792
CETS01040311
77412
Alphaproteobacteria
CAG
Leu
>WENV170371707
CETS01032147
481268
Alphaproteobacteria
TCC
Gly
>WENV170372129
CETS01067126
288727
Alphaproteobacteria
>WENV170373089
CETS01161177
288727
Alphaproteobacteria
>WENV170372198
CETS01071503
280784
Alphaproteobacteria
TGC
Ala
>WENV170372516
CETS01105099
487436
Alphaproteobacteria
TCC
Gly
>WENV170372358
CETS01088287
305403
Alphaproteobacteria
>WENV170373249
CETS01224629
282977
Alphaproteobacteria
CAT
Met
>WENV170373071
CETS01160352
287439
Alphaproteobacteria
CCA
Trp
>WENV170372264
CETS01078994
238389
Alphaproteobacteria
CCT
Arg
>WENV170372805
CETS01135897
181950
Alphaproteobacteria
TCT
Arg
>WENV170371852
CETS01044891
283320
Alphaproteobacteria
>WENV170371744
CETS01035242
121250
Alphaproteobacteria
TAG
Leu
>WENV170371356
CETS01004972
121250
Alphaproteobacteria
TAG
Leu
>WENV170371721
CETS01033191
178733
Alphaproteobacteria
CAT
Met
>WENV170371422
CETS01010590
427571
Alphaproteobacteria
GCC
Gly
>WENV170372610
CETS01115107
427571
Alphaproteobacteria
GCC
Gly
>WENV170373004
CETS01156523
427571
Alphaproteobacteria
GCC
Gly
>WENV170371879
CETS01046868
192131
Alphaproteobacteria
GTC
Asp
>WENV170373102
CETS01161582
192131
Alphaproteobacteria
GTC
Asp
>WENV170372863
CETS01141777
184517
Alphaproteobacteria
GGG
Pro
>WENV170373404
CETS01275895
317915
Alphaproteobacteria
GAA
Phe
>WENV170372593
CETS01113807
280860
Alphaproteobacteria
TAC
Val
>WENV170371365
CETS01006095
435083
Alphaproteobacteria
>WENV170372920
CETS01147684
435083
Alphaproteobacteria
>WENV170371950
CETS01051878
231082
Alphaproteobacteria
ACG
Arg
>WENV170371706
CETS01032127
192275
Alphaproteobacteria
GTG
His
>WENV170373370
CETS01266566
398998
Alphaproteobacteria
TTG
Gln
>WENV170372607
CETS01114826
400517
Alphaproteobacteria
GGT
Thr
>WENV170372315
CETS01083250
400517
Alphaproteobacteria
GGT
Thr
>WENV170372195
CETS01071344
481098
Alphaproteobacteria
CTG
Gln
>WENV170372094
CETS01063775
481098
Alphaproteobacteria
CTG
Gln
>WENV170371844
CETS01044203
481098
Alphaproteobacteria
CTG
Gln
>WENV170371836
CETS01043574
481098
Alphaproteobacteria
CTG
Gln
>WENV170371640
CETS01027162
481098
Alphaproteobacteria
CTG
Gln
>WENV170372995
CETS01154946
182475
Alphaproteobacteria
GTC
Asp
>WENV170371887
CETS01047142
190625
Alphaproteobacteria
ACG
Arg
>WENV170371626
CETS01026015
325687
Alphaproteobacteria
CCA
Trp
>WENV170371934
CETS01051058
212319
Alphaproteobacteria
GTG
His
>WENV170372237
CETS01074971
178736
Alphaproteobacteria
CCT
Arg
>WENV170371904
CETS01048880
282981
Alphaproteobacteria
CCA
Trp
>WENV170372414
CETS01093356
282981
Alphaproteobacteria
CCA
Trp
>WENV170372703
CETS01125927
282981
Alphaproteobacteria
CCA
Trp
>WENV170372390
CETS01091136
481099
Alphaproteobacteria
TCC
Gly
>WENV170371508
CETS01016344
481099
Alphaproteobacteria
TCC
Gly
>WENV170372624
CETS01116770
428327
Alphaproteobacteria
GCC
Gly
>WENV170371498
CETS01015738
480900
Alphaproteobacteria
GCA
Cys
>WENV170372781
CETS01133373
480900
Alphaproteobacteria
GCA
Cys
>WENV170371363
CETS01005938
403890
Alphaproteobacteria
GAC
Val
>WENV170372062
CETS01061392
13606
Alphaproteobacteria
GCT
Ser
>WENV170371964
CETS01052999
118150
Alphaproteobacteria
TAG
Leu
>WENV170372778
CETS01133061
305449
Alphaproteobacteria
CGT
Thr
>WENV170371831
CETS01042931
13340
Alphaproteobacteria
GCT
Ser
>WENV170372259
CETS01078303
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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