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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170557129
CXWL01019753
282899
Gammaproteobacteria
GTT
Asn
>WENV170557766
CXWL01036778
176064
Gammaproteobacteria
CAT
Met
>WENV170559851
CXWL01161389
3512
Gammaproteobacteria
>WENV170559486
CXWL01125487
330651
Gammaproteobacteria
TGT
Thr
>WENV170559945
CXWL01181385
178440
Gammaproteobacteria
CAT
Met
>WENV170559501
CXWL01126137
176628
Gammaproteobacteria
GGG
Pro
>WENV170559677
CXWL01136664
176628
Gammaproteobacteria
GGG
Pro
>WENV170557313
CXWL01024005
178164
Gammaproteobacteria
GAT
Ile
>WENV170559196
CXWL01113907
281229
Gammaproteobacteria
GTT
Asn
>WENV170559665
CXWL01135613
281229
Gammaproteobacteria
GTT
Asn
>WENV170559445
CXWL01123850
41141
Gammaproteobacteria
GGA
Ser
>WENV170558205
CXWL01056780
176631
Gammaproteobacteria
CCT
Arg
>WENV170559729
CXWL01143305
401696
Gammaproteobacteria
TTG
Gln
>WENV170559754
CXWL01146741
401696
Gammaproteobacteria
TTG
Gln
>WENV170555693
CXWL01001787
56093
Gammaproteobacteria
GGA
Ser
>WENV170558385
CXWL01066846
56093
Gammaproteobacteria
GGA
Ser
>WENV170556016
CXWL01003862
357066
Gammaproteobacteria
TGC
Ala
>WENV170558524
CXWL01076027
357066
Gammaproteobacteria
TGC
Ala
>WENV170559815
CXWL01154316
29592
Gammaproteobacteria
GGA
Ser
>WENV170559952
CXWL01183449
29592
Gammaproteobacteria
GGA
Ser
>WENV170559225
CXWL01114946
480506
Gammaproteobacteria
CCC
Gly
>WENV170559275
CXWL01117416
283441
Gammaproteobacteria
>WENV170559395
CXWL01121418
283441
Gammaproteobacteria
>WENV170559511
CXWL01126647
283441
Gammaproteobacteria
>WENV170559745
CXWL01144605
283441
Gammaproteobacteria
>WENV170556748
CXWL01013137
178540
Gammaproteobacteria
TGG
Pro
>WENV170559113
CXWL01110713
56151
Gammaproteobacteria
TGA
Ser
>WENV170559649
CXWL01134716
399345
Gammaproteobacteria
TCC
Gly
>WENV170557128
CXWL01019753
178168
Gammaproteobacteria
ACG
Arg
>WENV170559364
CXWL01120504
20296
Gammaproteobacteria
TGA
Ser
>WENV170558228
CXWL01058151
480983
Gammaproteobacteria
CCC
Gly
>WENV170559324
CXWL01119237
73161
Gammaproteobacteria
CAG
Leu
>WENV170559801
CXWL01151842
175986
Gammaproteobacteria
ACG
Arg
>WENV170559915
CXWL01174819
56566
Gammaproteobacteria
GGA
Ser
>WENV170559743
CXWL01144485
412370
Gammaproteobacteria
>WENV170559865
CXWL01162771
73558
Gammaproteobacteria
CAG
Leu
>WENV170555621
CXWL01001487
287558
Gammaproteobacteria
TTC
Glu
>WENV170555622
CXWL01001487
287558
Gammaproteobacteria
TTC
Glu
>WENV170557314
CXWL01024005
281418
Gammaproteobacteria
TGC
Ala
>WENV170559717
CXWL01141634
177984
Gammaproteobacteria
CCT
Arg
>WENV170559304
CXWL01118473
117930
Gammaproteobacteria
CAA
Leu
>WENV170559838
CXWL01158767
117930
Gammaproteobacteria
CAA
Leu
>WENV170557871
CXWL01040929
201377
Gammaproteobacteria
TGG
Pro
>WENV170556721
CXWL01012628
201377
Gammaproteobacteria
TGG
Pro
>WENV170559472
CXWL01124816
179613
Gammaproteobacteria
CAT
Met
>WENV170559809
CXWL01153526
83194
Gammaproteobacteria
GAG
Leu
>WENV170557193
CXWL01020940
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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