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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170572289
FLOH01000702
399001
Alphaproteobacteria
GAC
Val
>WENV170572052
FLOH01000497
291892
Alphaproteobacteria
TAC
Val
>WENV170571922
FLOH01000382
287529
Alphaproteobacteria
TAC
Val
>WENV170570703
FLOH01000016
191064
Alphaproteobacteria
CCG
Arg
>WENV170571686
FLOH01000267
305403
Alphaproteobacteria
>WENV170571933
FLOH01000395
179941
Alphaproteobacteria
CAT
Met
>WENV170572042
FLOH01000486
73986
Alphaproteobacteria
CAG
Leu
>WENV170571648
FLOH01000244
398999
Alphaproteobacteria
GGT
Thr
>WENV170571304
FLOH01000126
419842
Alphaproteobacteria
GCC
Gly
>WENV170572143
FLOH01000559
481326
Alphaproteobacteria
GCA
Cys
>WENV170571830
FLOH01000332
215287
Alphaproteobacteria
GGG
Pro
>WENV170571235
FLOH01000106
73721
Alphaproteobacteria
GAG
Leu
>WENV170570734
FLOH01000019
315852
Alphaproteobacteria
TGT
Thr
>WENV170572948
FLOH01001565
296763
Alphaproteobacteria
CCA
Trp
>WENV170572271
FLOH01000680
428327
Alphaproteobacteria
GCC
Gly
>WENV170571942
FLOH01000401
404182
Alphaproteobacteria
CAC
Val
>WENV170571208
FLOH01000097
398996
Alphaproteobacteria
GCC
Gly
>WENV170572439
FLOH01000868
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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