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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170738334
LULP01000003
118247
Alphaproteobacteria
CAA
Leu
>WENV170738333
LULP01000003
178576
Alphaproteobacteria
ACG
Arg
>WENV170738340
LULP01000011
29655
Alphaproteobacteria
TGA
Ser
>WENV170738351
LULP01000021
176153
Alphaproteobacteria
CAT
Met
>WENV170738350
LULP01000021
73167
Alphaproteobacteria
GAG
Leu
>WENV170738370
LULP01000057
481048
Alphaproteobacteria
GCA
Cys
>WENV170738374
LULP01000070
286018
Alphaproteobacteria
CCA
Trp
>WENV170738402
LULP01000111
400419
Alphaproteobacteria
TTG
Gln
>WENV170738404
LULP01000122
481073
Alphaproteobacteria
CTG
Gln
>WENV170738412
LULP01000145
398981
Alphaproteobacteria
GTT
Asn
>WENV170738430
LULP01000213
118150
Alphaproteobacteria
TAG
Leu
>WENV170738490
LULP01000461
178799
Alphaproteobacteria
CAT
Met
>WENV170738589
LULP01001059
180029
Alphaproteobacteria
CAT
Met
>WENV170738590
LULP01001059
398994
Alphaproteobacteria
GTT
Asn
>WENV170738649
LULP01001529
481074
Alphaproteobacteria
TCC
Gly
>WENV170738668
LULP01001826
118213
Alphaproteobacteria
TAG
Leu
>WENV170738676
LULP01001950
399001
Alphaproteobacteria
GAC
Val
>WENV170738733
LULP01002793
400930
Alphaproteobacteria
GAA
Phe
>WENV170738879
LULP01006039
140963
Alphaproteobacteria
>WENV170738900
LULP01006831
401037
Alphaproteobacteria
TTG
Gln
>WENV170738970
LULP01009714
400517
Alphaproteobacteria
GGT
Thr
>WENV170738994
LULP01012109
282981
Alphaproteobacteria
CCA
Trp
>WENV170739000
LULP01012797
400211
Alphaproteobacteria
>WENV170739001
LULP01012836
176153
Alphaproteobacteria
CAT
Met
>WENV170739005
LULP01013181
480900
Alphaproteobacteria
GCA
Cys
>WENV170739077
LULP01020122
73523
Alphaproteobacteria
CAG
Leu
>WENV170739102
LULP01021438
400530
Alphaproteobacteria
GAC
Val
>WENV170739106
LULP01021804
400249
Alphaproteobacteria
GCC
Gly
>WENV170739108
LULP01022330
178731
Alphaproteobacteria
GTC
Asp
>WENV170739162
LULP01029814
481802
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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