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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170786956
MDSV01011010
360947
Alphaproteobacteria
TTT
Lys
>WENV170797422
MDSV01180114
360947
Alphaproteobacteria
TTT
Lys
>WENV170798217
MDSV01193201
360947
Alphaproteobacteria
TTT
Lys
>WENV170795489
MDSV01149515
29627
Alphaproteobacteria
GGA
Ser
>WENV170786305
MDSV01001072
293691
Alphaproteobacteria
GAA
Phe
>WENV170790302
MDSV01064107
402222
Alphaproteobacteria
GTT
Asn
>WENV170787478
MDSV01019258
424450
Alphaproteobacteria
GGT
Thr
>WENV170794476
MDSV01132781
424450
Alphaproteobacteria
GGT
Thr
>WENV170793566
MDSV01118460
29841
Alphaproteobacteria
GGA
Ser
>WENV170787985
MDSV01025962
140876
Alphaproteobacteria
>WENV170794402
MDSV01131655
176240
Alphaproteobacteria
CAT
Met
>WENV170789685
MDSV01053839
20437
Alphaproteobacteria
GGA
Ser
>WENV170790807
MDSV01072129
201940
Alphaproteobacteria
CAT
Met
>WENV170787010
MDSV01011694
201940
Alphaproteobacteria
CAT
Met
>WENV170801295
MDSV01244516
201940
Alphaproteobacteria
CAT
Met
>WENV170800816
MDSV01236593
201940
Alphaproteobacteria
CAT
Met
>WENV170799402
MDSV01213018
201940
Alphaproteobacteria
CAT
Met
>WENV170798720
MDSV01201190
201940
Alphaproteobacteria
CAT
Met
>WENV170795808
MDSV01154354
201940
Alphaproteobacteria
CAT
Met
>WENV170795174
MDSV01143936
201940
Alphaproteobacteria
CAT
Met
>WENV170793731
MDSV01121305
201940
Alphaproteobacteria
CAT
Met
>WENV170787798
MDSV01023732
197241
Alphaproteobacteria
GGG
Pro
>WENV170798721
MDSV01201197
290043
Alphaproteobacteria
TGC
Ala
>WENV170788248
MDSV01030462
481268
Alphaproteobacteria
TCC
Gly
>WENV170794701
MDSV01136292
280788
Alphaproteobacteria
TTT
Lys
>WENV170800562
MDSV01232348
280788
Alphaproteobacteria
TTT
Lys
>WENV170800759
MDSV01235502
280788
Alphaproteobacteria
TTT
Lys
>WENV170799017
MDSV01206377
509917
Alphaproteobacteria
TCC
Gly
>WENV170799367
MDSV01212372
75222
Alphaproteobacteria
GAG
Leu
>WENV170791480
MDSV01083959
487436
Alphaproteobacteria
TCC
Gly
>WENV170797309
MDSV01178265
281659
Alphaproteobacteria
TGC
Ala
>WENV170790303
MDSV01064107
496447
Alphaproteobacteria
GCA
Cys
>WENV170801120
MDSV01241258
284764
Alphaproteobacteria
CAT
Met
>WENV170787490
MDSV01019323
305403
Alphaproteobacteria
>WENV170786343
MDSV01001746
232927
Alphaproteobacteria
CAT
Met
>WENV170789068
MDSV01044514
29702
Alphaproteobacteria
GGA
Ser
>WENV170799763
MDSV01219025
408543
Alphaproteobacteria
GAC
Val
>WENV170793473
MDSV01116826
431764
Alphaproteobacteria
GTT
Asn
>WENV170799782
MDSV01219335
181950
Alphaproteobacteria
TCT
Arg
>WENV170794497
MDSV01133023
176234
Alphaproteobacteria
CCT
Arg
>WENV170787168
MDSV01014392
400250
Alphaproteobacteria
GAC
Val
>WENV170786358
MDSV01002089
178503
Alphaproteobacteria
GGG
Pro
>WENV170798412
MDSV01196377
29727
Alphaproteobacteria
CGA
Ser
>WENV170787943
MDSV01025455
29727
Alphaproteobacteria
CGA
Ser
>WENV170791849
MDSV01089842
400544
Alphaproteobacteria
GGT
Thr
>WENV170790649
MDSV01069658
400517
Alphaproteobacteria
GGT
Thr
>WENV170791315
MDSV01080798
281650
Alphaproteobacteria
CCA
Trp
>WENV170787075
MDSV01012763
281650
Alphaproteobacteria
CCA
Trp
>WENV170801046
MDSV01240179
281650
Alphaproteobacteria
CCA
Trp
>WENV170797245
MDSV01177448
281650
Alphaproteobacteria
CCA
Trp
>WENV170798020
MDSV01190038
481098
Alphaproteobacteria
CTG
Gln
>WENV170796503
MDSV01165276
176490
Alphaproteobacteria
CAT
Met
>WENV170794841
MDSV01138471
228432
Alphaproteobacteria
TGG
Pro
>WENV170797150
MDSV01175976
228432
Alphaproteobacteria
TGG
Pro
>WENV170797185
MDSV01176774
228432
Alphaproteobacteria
TGG
Pro
>WENV170794581
MDSV01134348
398994
Alphaproteobacteria
GTT
Asn
>WENV170798948
MDSV01205157
398994
Alphaproteobacteria
GTT
Asn
>WENV170786254
MDSV01000136
398994
Alphaproteobacteria
GTT
Asn
>WENV170799395
MDSV01212922
282981
Alphaproteobacteria
CCA
Trp
>WENV170794097
MDSV01126724
354296
Alphaproteobacteria
TAC
Val
>WENV170798222
MDSV01193242
296763
Alphaproteobacteria
CCA
Trp
>WENV170793406
MDSV01115668
410893
Alphaproteobacteria
TTC
Glu
>WENV170799281
MDSV01210819
428327
Alphaproteobacteria
GCC
Gly
>WENV170789306
MDSV01048222
84860
Alphaproteobacteria
CAG
Leu
>WENV170793869
MDSV01123481
308123
Alphaproteobacteria
CCA
Trp
>WENV170795040
MDSV01141719
308123
Alphaproteobacteria
CCA
Trp
>WENV170795740
MDSV01153286
283257
Alphaproteobacteria
TTT
Lys
>WENV170791824
MDSV01089430
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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