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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170825893
MDSY01101837
280873
Alphaproteobacteria
CCA
Trp
>WENV170824290
MDSY01073149
399001
Alphaproteobacteria
GAC
Val
>WENV170827612
MDSY01132859
399001
Alphaproteobacteria
GAC
Val
>WENV170821478
MDSY01022775
179639
Alphaproteobacteria
ACG
Arg
>WENV170822304
MDSY01037852
402222
Alphaproteobacteria
GTT
Asn
>WENV170820888
MDSY01013435
400930
Alphaproteobacteria
GAA
Phe
>WENV170821808
MDSY01028537
400930
Alphaproteobacteria
GAA
Phe
>WENV170824679
MDSY01080204
400930
Alphaproteobacteria
GAA
Phe
>WENV170824744
MDSY01081415
400930
Alphaproteobacteria
GAA
Phe
>WENV170825666
MDSY01097574
400930
Alphaproteobacteria
GAA
Phe
>WENV170825812
MDSY01100283
400930
Alphaproteobacteria
GAA
Phe
>WENV170827579
MDSY01132069
400930
Alphaproteobacteria
GAA
Phe
>WENV170824415
MDSY01075420
29841
Alphaproteobacteria
GGA
Ser
>WENV170826978
MDSY01120615
29841
Alphaproteobacteria
GGA
Ser
>WENV170827646
MDSY01133612
29841
Alphaproteobacteria
GGA
Ser
>WENV170821626
MDSY01025090
140876
Alphaproteobacteria
>WENV170823706
MDSY01062300
140876
Alphaproteobacteria
>WENV170827343
MDSY01127332
140876
Alphaproteobacteria
>WENV170827958
MDSY01139540
140876
Alphaproteobacteria
>WENV170820483
MDSY01005450
179390
Alphaproteobacteria
TGG
Pro
>WENV170823262
MDSY01054253
176240
Alphaproteobacteria
CAT
Met
>WENV170823927
MDSY01066865
178725
Alphaproteobacteria
GTG
His
>WENV170824307
MDSY01073513
178725
Alphaproteobacteria
GTG
His
>WENV170827778
MDSY01136054
178725
Alphaproteobacteria
GTG
His
>WENV170825685
MDSY01097886
181926
Alphaproteobacteria
ACG
Arg
>WENV170828324
MDSY01147354
180022
Alphaproteobacteria
ACG
Arg
>WENV170820199
MDSY01000213
180022
Alphaproteobacteria
ACG
Arg
>WENV170821487
MDSY01022991
481268
Alphaproteobacteria
TCC
Gly
>WENV170823440
MDSY01057698
481268
Alphaproteobacteria
TCC
Gly
>WENV170826406
MDSY01110293
481268
Alphaproteobacteria
TCC
Gly
>WENV170827563
MDSY01131684
280788
Alphaproteobacteria
TTT
Lys
>WENV170827602
MDSY01132618
73490
Alphaproteobacteria
GAG
Leu
>WENV170828513
MDSY01151275
399480
Alphaproteobacteria
GAA
Phe
>WENV170821333
MDSY01020456
282924
Alphaproteobacteria
CGC
Ala
>WENV170827390
MDSY01128336
282924
Alphaproteobacteria
CGC
Ala
>WENV170825957
MDSY01102655
181950
Alphaproteobacteria
TCT
Arg
>WENV170827842
MDSY01137530
400211
Alphaproteobacteria
>WENV170827843
MDSY01137530
400211
Alphaproteobacteria
>WENV170820795
MDSY01011000
179883
Alphaproteobacteria
CCA
Trp
>WENV170820889
MDSY01013435
398999
Alphaproteobacteria
GGT
Thr
>WENV170824916
MDSY01084371
398999
Alphaproteobacteria
GGT
Thr
>WENV170821740
MDSY01027236
400250
Alphaproteobacteria
GAC
Val
>WENV170822393
MDSY01039480
178503
Alphaproteobacteria
GGG
Pro
>WENV170824207
MDSY01071689
178503
Alphaproteobacteria
GGG
Pro
>WENV170828941
MDSY01158316
178503
Alphaproteobacteria
GGG
Pro
>WENV170824103
MDSY01069666
402067
Alphaproteobacteria
GCC
Gly
>WENV170820522
MDSY01006148
402067
Alphaproteobacteria
GCC
Gly
>WENV170823980
MDSY01067820
283510
Alphaproteobacteria
TTT
Lys
>WENV170826032
MDSY01104356
398998
Alphaproteobacteria
TTG
Gln
>WENV170827903
MDSY01138690
398998
Alphaproteobacteria
TTG
Gln
>WENV170824173
MDSY01071053
400544
Alphaproteobacteria
GGT
Thr
>WENV170824183
MDSY01071257
400544
Alphaproteobacteria
GGT
Thr
>WENV170824077
MDSY01069333
400045
Alphaproteobacteria
GCC
Gly
>WENV170820677
MDSY01008731
282587
Alphaproteobacteria
>WENV170823004
MDSY01049898
286018
Alphaproteobacteria
CCA
Trp
>WENV170827110
MDSY01123134
286018
Alphaproteobacteria
CCA
Trp
>WENV170820710
MDSY01009108
398994
Alphaproteobacteria
GTT
Asn
>WENV170823109
MDSY01051641
398994
Alphaproteobacteria
GTT
Asn
>WENV170827050
MDSY01121993
398994
Alphaproteobacteria
GTT
Asn
>WENV170826977
MDSY01120612
283556
Alphaproteobacteria
TTT
Lys
>WENV170825181
MDSY01088509
178799
Alphaproteobacteria
CAT
Met
>WENV170826891
MDSY01118990
178799
Alphaproteobacteria
CAT
Met
>WENV170827858
MDSY01137901
178799
Alphaproteobacteria
CAT
Met
>WENV170825795
MDSY01100021
281676
Alphaproteobacteria
TAC
Val
>WENV170824137
MDSY01070216
281676
Alphaproteobacteria
TAC
Val
>WENV170823076
MDSY01051249
481096
Alphaproteobacteria
CCC
Gly
>WENV170825952
MDSY01102566
178507
Alphaproteobacteria
GTG
His
>WENV170826563
MDSY01112790
178237
Alphaproteobacteria
CAT
Met
>WENV170826580
MDSY01113071
178784
Alphaproteobacteria
CAT
Met
>WENV170820364
MDSY01003443
178784
Alphaproteobacteria
CAT
Met
>WENV170821524
MDSY01023491
282980
Alphaproteobacteria
TGT
Thr
>WENV170820442
MDSY01004812
398996
Alphaproteobacteria
GCC
Gly
>WENV170826703
MDSY01115362
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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