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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
136 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170889806
MDTD01001110
176662
Gammaproteobacteria
ACG
Arg
>WENV170889807
MDTD01001110
176662
Gammaproteobacteria
ACG
Arg
>WENV170896969
MDTD01103742
176662
Gammaproteobacteria
ACG
Arg
>WENV170897254
MDTD01108414
176662
Gammaproteobacteria
ACG
Arg
>WENV170900627
MDTD01157117
232119
Gammaproteobacteria
ACG
Arg
>WENV170900302
MDTD01152343
232119
Gammaproteobacteria
ACG
Arg
>WENV170889796
MDTD01000912
230011
Gammaproteobacteria
ACG
Arg
>WENV170894596
MDTD01068019
230011
Gammaproteobacteria
ACG
Arg
>WENV170902445
MDTD01185294
186591
Gammaproteobacteria
ACG
Arg
>WENV170891408
MDTD01023477
186591
Gammaproteobacteria
ACG
Arg
>WENV170890547
MDTD01011658
186591
Gammaproteobacteria
ACG
Arg
>WENV170892390
MDTD01037638
73123
Gammaproteobacteria
CAA
Leu
>WENV170891906
MDTD01030985
74240
Gammaproteobacteria
CAA
Leu
>WENV170902834
MDTD01192110
74048
Gammaproteobacteria
CAA
Leu
>WENV170891117
MDTD01019524
179284
Gammaproteobacteria
CAT
Met
>WENV170895164
MDTD01075579
180053
Gammaproteobacteria
CAT
Met
>WENV170893811
MDTD01056771
176545
Gammaproteobacteria
CAT
Met
>WENV170895391
MDTD01078735
176544
Gammaproteobacteria
CAT
Met
>WENV170895539
MDTD01081002
176544
Gammaproteobacteria
CAT
Met
>WENV170895505
MDTD01080313
198943
Gammaproteobacteria
CAT
Met
>WENV170902927
MDTD01193706
176478
Gammaproteobacteria
CAT
Met
>WENV170896091
MDTD01089983
314350
Gammaproteobacteria
CCA
Trp
>WENV170893465
MDTD01052086
340901
Gammaproteobacteria
CCA
Trp
>WENV170901469
MDTD01171009
180679
Gammaproteobacteria
CCA
Trp
>WENV170897811
MDTD01117500
180679
Gammaproteobacteria
CCA
Trp
>WENV170895565
MDTD01081535
180679
Gammaproteobacteria
CCA
Trp
>WENV170892860
MDTD01043840
180679
Gammaproteobacteria
CCA
Trp
>WENV170891332
MDTD01022485
180679
Gammaproteobacteria
CCA
Trp
>WENV170895489
MDTD01080075
209464
Gammaproteobacteria
CCG
Arg
>WENV170891233
MDTD01021153
180678
Gammaproteobacteria
CCG
Arg
>WENV170894784
MDTD01070540
401684
Gammaproteobacteria
CCT
Arg
>WENV170895553
MDTD01081282
176664
Gammaproteobacteria
CCT
Arg
>WENV170893838
MDTD01057038
176665
Gammaproteobacteria
CGG
Pro
>WENV170895531
MDTD01080880
282894
Gammaproteobacteria
GAA
Phe
>WENV170896483
MDTD01096288
292174
Gammaproteobacteria
GAA
Phe
>WENV170892394
MDTD01037663
292174
Gammaproteobacteria
GAA
Phe
>WENV170896986
MDTD01103993
346373
Gammaproteobacteria
GAA
Phe
>WENV170897579
MDTD01113973
346373
Gammaproteobacteria
GAA
Phe
>WENV170901481
MDTD01171180
346373
Gammaproteobacteria
GAA
Phe
>WENV170896628
MDTD01098604
218635
Gammaproteobacteria
GAC
Val
>WENV170890164
MDTD01005669
178025
Gammaproteobacteria
GAC
Val
>WENV170900154
MDTD01149979
178169
Gammaproteobacteria
GAC
Val
>WENV170896451
MDTD01095544
398943
Gammaproteobacteria
GAC
Val
>WENV170903016
MDTD01195327
180680
Gammaproteobacteria
GAC
Val
>WENV170895493
MDTD01080138
180680
Gammaproteobacteria
GAC
Val
>WENV170893871
MDTD01057523
180680
Gammaproteobacteria
GAC
Val
>WENV170893377
MDTD01050868
180680
Gammaproteobacteria
GAC
Val
>WENV170890428
MDTD01009669
179710
Gammaproteobacteria
GAC
Val
>WENV170891416
MDTD01023668
179710
Gammaproteobacteria
GAC
Val
>WENV170896781
MDTD01100588
120827
Gammaproteobacteria
GAG
Leu
>WENV170901123
MDTD01165259
74339
Gammaproteobacteria
GAG
Leu
>WENV170893739
MDTD01055929
176301
Gammaproteobacteria
GAT
Ile
>WENV170893807
MDTD01056643
480653
Gammaproteobacteria
GCA
Cys
>WENV170899754
MDTD01144164
480516
Gammaproteobacteria
GCA
Cys
>WENV170897605
MDTD01114470
480516
Gammaproteobacteria
GCA
Cys
>WENV170897494
MDTD01112421
480516
Gammaproteobacteria
GCA
Cys
>WENV170893249
MDTD01049949
508107
Gammaproteobacteria
GCA
Cys
>WENV170898126
MDTD01121341
481314
Gammaproteobacteria
GCA
Cys
>WENV170899753
MDTD01144164
306288
Gammaproteobacteria
GCC
Gly
>WENV170897493
MDTD01112421
306288
Gammaproteobacteria
GCC
Gly
>WENV170897829
MDTD01117632
306288
Gammaproteobacteria
GCC
Gly
>WENV170892833
MDTD01043273
20664
Gammaproteobacteria
GCT
Ser
>WENV170891894
MDTD01030757
20664
Gammaproteobacteria
GCT
Ser
>WENV170894774
MDTD01070436
29834
Gammaproteobacteria
GCT
Ser
>WENV170900626
MDTD01157117
13452
Gammaproteobacteria
GCT
Ser
>WENV170901484
MDTD01171271
20618
Gammaproteobacteria
GGA
Ser
>WENV170890503
MDTD01010907
20618
Gammaproteobacteria
GGA
Ser
>WENV170897028
MDTD01105025
60942
Gammaproteobacteria
GGA
Ser
>WENV170901350
MDTD01169042
370389
Gammaproteobacteria
GGC
Ala
>WENV170892702
MDTD01041591
370389
Gammaproteobacteria
GGC
Ala
>WENV170891179
MDTD01020463
370389
Gammaproteobacteria
GGC
Ala
>WENV170890897
MDTD01016303
370389
Gammaproteobacteria
GGC
Ala
>WENV170895436
MDTD01079308
300318
Gammaproteobacteria
GGC
Ala
>WENV170902644
MDTD01188890
178543
Gammaproteobacteria
GGG
Pro
>WENV170891289
MDTD01022070
292194
Gammaproteobacteria
GGT
Thr
>WENV170894838
MDTD01071463
296672
Gammaproteobacteria
GGT
Thr
>WENV170893345
MDTD01050544
140925
Gammaproteobacteria
GTA
Tyr
>WENV170890167
MDTD01005786
126555
Gammaproteobacteria
GTA
Tyr
>WENV170894836
MDTD01071463
141076
Gammaproteobacteria
GTA
Tyr
>WENV170898570
MDTD01128095
281908
Gammaproteobacteria
GTG
His
>WENV170899071
MDTD01134838
280882
Gammaproteobacteria
GTG
His
>WENV170895633
MDTD01082259
291402
Gammaproteobacteria
GTG
His
>WENV170895381
MDTD01078570
291402
Gammaproteobacteria
GTG
His
>WENV170896520
MDTD01097017
281283
Gammaproteobacteria
GTG
His
>WENV170889728
MDTD01000306
286691
Gammaproteobacteria
GTG
His
>WENV170890738
MDTD01014317
178471
Gammaproteobacteria
GTT
Asn
>WENV170897511
MDTD01112637
178471
Gammaproteobacteria
GTT
Asn
>WENV170897512
MDTD01112637
178471
Gammaproteobacteria
GTT
Asn
>WENV170901900
MDTD01177509
178471
Gammaproteobacteria
GTT
Asn
>WENV170902220
MDTD01181837
178471
Gammaproteobacteria
GTT
Asn
>WENV170902221
MDTD01181837
178471
Gammaproteobacteria
GTT
Asn
>WENV170902779
MDTD01191236
92638
Gammaproteobacteria
TAA
Leu
>WENV170891751
MDTD01028673
73063
Gammaproteobacteria
TAA
Leu
>WENV170899514
MDTD01140919
282550
Gammaproteobacteria
TAC
Val
>WENV170897227
MDTD01107942
282550
Gammaproteobacteria
TAC
Val
>WENV170892640
MDTD01040718
299855
Gammaproteobacteria
TAC
Val
>WENV170898542
MDTD01127615
299855
Gammaproteobacteria
TAC
Val
>WENV170903040
MDTD01195799
342077
Gammaproteobacteria
TAC
Val
>WENV170901069
MDTD01164247
118413
Gammaproteobacteria
TAG
Leu
>WENV170898541
MDTD01127615
118414
Gammaproteobacteria
TAG
Leu
>WENV170898571
MDTD01128095
118640
Gammaproteobacteria
TAG
Leu
>WENV170890894
MDTD01016286
239021
Gammaproteobacteria
TCT
Arg
>WENV170902074
MDTD01179664
239021
Gammaproteobacteria
TCT
Arg
>WENV170891748
MDTD01028673
56108
Gammaproteobacteria
TGA
Ser
>WENV170901175
MDTD01166052
20968
Gammaproteobacteria
TGA
Ser
>WENV170902200
MDTD01181550
243308
Gammaproteobacteria
TGG
Pro
>WENV170900547
MDTD01155853
243308
Gammaproteobacteria
TGG
Pro
>WENV170896518
MDTD01097017
243308
Gammaproteobacteria
TGG
Pro
>WENV170895275
MDTD01077250
243308
Gammaproteobacteria
TGG
Pro
>WENV170892318
MDTD01036799
243308
Gammaproteobacteria
TGG
Pro
>WENV170901176
MDTD01166089
197498
Gammaproteobacteria
TGG
Pro
>WENV170894448
MDTD01065802
242775
Gammaproteobacteria
TGG
Pro
>WENV170895206
MDTD01076391
242775
Gammaproteobacteria
TGG
Pro
>WENV170902135
MDTD01180528
242775
Gammaproteobacteria
TGG
Pro
>WENV170902857
MDTD01192521
180681
Gammaproteobacteria
TGG
Pro
>WENV170898572
MDTD01128095
180681
Gammaproteobacteria
TGG
Pro
>WENV170898568
MDTD01128095
180681
Gammaproteobacteria
TGG
Pro
>WENV170894511
MDTD01066685
180681
Gammaproteobacteria
TGG
Pro
>WENV170901339
MDTD01168910
201377
Gammaproteobacteria
TGG
Pro
>WENV170890166
MDTD01005786
281275
Gammaproteobacteria
TGT
Thr
>WENV170903291
MDTD01199439
334421
Gammaproteobacteria
TGT
Thr
>WENV170891747
MDTD01028640
282018
Gammaproteobacteria
TGT
Thr
>WENV170902758
MDTD01190798
315775
Gammaproteobacteria
TGT
Thr
>WENV170894308
MDTD01063623
282902
Gammaproteobacteria
TGT
Thr
>WENV170890802
MDTD01015110
282902
Gammaproteobacteria
TGT
Thr
>WENV170892392
MDTD01037638
281282
Gammaproteobacteria
TTC
Glu
>WENV170897835
MDTD01117690
281282
Gammaproteobacteria
TTC
Glu
>WENV170890048
MDTD01004056
402723
Gammaproteobacteria
TTG
Gln
>WENV170893376
MDTD01050868
285547
Gammaproteobacteria
TTG
Gln
>WENV170895538
MDTD01081002
285547
Gammaproteobacteria
TTG
Gln
>WENV170891112
MDTD01019460
329164
Gammaproteobacteria
TTT
Lys
>WENV170902083
MDTD01179760
351236
Gammaproteobacteria
TTT
Lys
>WENV170895975
MDTD01088159
290359
Gammaproteobacteria
TTT
Lys
>WENV170898432
MDTD01125835
312181
Gammaproteobacteria
TTT
Lys
>WENV170895845
MDTD01086054
281939
Gammaproteobacteria
TTT
Lys
>WENV170893700
MDTD01055175
281939
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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