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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170963580
MRWG01000311
284706
Gammaproteobacteria
GTT
Asn
>WENV170963337
MRWG01000111
20552
Gammaproteobacteria
GCT
Ser
>WENV170963438
MRWG01000186
20552
Gammaproteobacteria
GCT
Ser
>WENV170963942
MRWG01001458
20552
Gammaproteobacteria
GCT
Ser
>WENV170964845
MRWG01057268
73123
Gammaproteobacteria
CAA
Leu
>WENV170964836
MRWG01054509
297858
Gammaproteobacteria
TGC
Ala
>WENV170963498
MRWG01000237
198275
Gammaproteobacteria
TCT
Arg
>WENV170964777
MRWG01042492
178164
Gammaproteobacteria
GAT
Ile
>WENV170963601
MRWG01000351
74766
Gammaproteobacteria
CAG
Leu
>WENV170964608
MRWG01023321
281275
Gammaproteobacteria
TGT
Thr
>WENV170964971
MRWG01091294
314350
Gammaproteobacteria
CCA
Trp
>WENV170963927
MRWG01001388
314350
Gammaproteobacteria
CCA
Trp
>WENV170964942
MRWG01084559
180053
Gammaproteobacteria
CAT
Met
>WENV170964657
MRWG01027570
180053
Gammaproteobacteria
CAT
Met
>WENV170964377
MRWG01009561
180053
Gammaproteobacteria
CAT
Met
>WENV170964454
MRWG01013216
176662
Gammaproteobacteria
ACG
Arg
>WENV170964455
MRWG01013216
176662
Gammaproteobacteria
ACG
Arg
>WENV170963338
MRWG01000111
178175
Gammaproteobacteria
ACG
Arg
>WENV170964838
MRWG01055009
120827
Gammaproteobacteria
GAG
Leu
>WENV170964642
MRWG01026038
120827
Gammaproteobacteria
GAG
Leu
>WENV170964453
MRWG01013216
29834
Gammaproteobacteria
GCT
Ser
>WENV170963643
MRWG01000417
282897
Gammaproteobacteria
TTT
Lys
>WENV170964450
MRWG01012603
304066
Gammaproteobacteria
TTT
Lys
>WENV170963714
MRWG01000575
304066
Gammaproteobacteria
TTT
Lys
>WENV170964097
MRWG01002977
304066
Gammaproteobacteria
TTT
Lys
>WENV170964557
MRWG01019019
176520
Gammaproteobacteria
CAT
Met
>WENV170964972
MRWG01092333
176520
Gammaproteobacteria
CAT
Met
>WENV170964610
MRWG01023321
399250
Gammaproteobacteria
TCC
Gly
>WENV170964727
MRWG01034785
140925
Gammaproteobacteria
GTA
Tyr
>WENV170964185
MRWG01004529
140925
Gammaproteobacteria
GTA
Tyr
>WENV170963301
MRWG01000087
483085
Gammaproteobacteria
GCA
Cys
>WENV170964803
MRWG01046556
281282
Gammaproteobacteria
TTC
Glu
>WENV170964804
MRWG01046613
281282
Gammaproteobacteria
TTC
Glu
>WENV170964925
MRWG01076220
281282
Gammaproteobacteria
TTC
Glu
>WENV170964943
MRWG01084640
281282
Gammaproteobacteria
TTC
Glu
>WENV170963094
MRWG01000010
282550
Gammaproteobacteria
TAC
Val
>WENV170964910
MRWG01070288
282550
Gammaproteobacteria
TAC
Val
>WENV170964964
MRWG01089625
176663
Gammaproteobacteria
GGG
Pro
>WENV170964415
MRWG01010613
176663
Gammaproteobacteria
GGG
Pro
>WENV170963778
MRWG01000742
176663
Gammaproteobacteria
GGG
Pro
>WENV170963867
MRWG01001061
176663
Gammaproteobacteria
GGG
Pro
>WENV170964752
MRWG01039253
74339
Gammaproteobacteria
GAG
Leu
>WENV170964751
MRWG01039246
74339
Gammaproteobacteria
GAG
Leu
>WENV170964796
MRWG01045753
292006
Gammaproteobacteria
TGC
Ala
>WENV170964477
MRWG01014096
292006
Gammaproteobacteria
TGC
Ala
>WENV170964393
MRWG01009845
292006
Gammaproteobacteria
TGC
Ala
>WENV170964948
MRWG01085075
480516
Gammaproteobacteria
GCA
Cys
>WENV170964947
MRWG01085036
480516
Gammaproteobacteria
GCA
Cys
>WENV170964941
MRWG01083380
480516
Gammaproteobacteria
GCA
Cys
>WENV170964940
MRWG01083341
480516
Gammaproteobacteria
GCA
Cys
>WENV170964935
MRWG01080852
480516
Gammaproteobacteria
GCA
Cys
>WENV170964815
MRWG01048997
480516
Gammaproteobacteria
GCA
Cys
>WENV170964368
MRWG01009202
480516
Gammaproteobacteria
GCA
Cys
>WENV170963597
MRWG01000346
480516
Gammaproteobacteria
GCA
Cys
>WENV170962998
MRWG01000001
480516
Gammaproteobacteria
GCA
Cys
>WENV170963497
MRWG01000237
197498
Gammaproteobacteria
TGG
Pro
>WENV170964915
MRWG01072505
292174
Gammaproteobacteria
GAA
Phe
>WENV170963392
MRWG01000151
299855
Gammaproteobacteria
TAC
Val
>WENV170964728
MRWG01034785
481325
Gammaproteobacteria
TCC
Gly
>WENV170964795
MRWG01045753
183701
Gammaproteobacteria
GAT
Ile
>WENV170963603
MRWG01000351
307269
Gammaproteobacteria
TTC
Glu
>WENV170964065
MRWG01002641
284115
Gammaproteobacteria
TAC
Val
>WENV170964514
MRWG01015596
284115
Gammaproteobacteria
TAC
Val
>WENV170964516
MRWG01015596
284115
Gammaproteobacteria
TAC
Val
>WENV170964843
MRWG01057080
284115
Gammaproteobacteria
TAC
Val
>WENV170964644
MRWG01026308
316303
Gammaproteobacteria
TTT
Lys
>WENV170964645
MRWG01026308
316303
Gammaproteobacteria
TTT
Lys
>WENV170963732
MRWG01000608
176065
Gammaproteobacteria
CCT
Arg
>WENV170964934
MRWG01080852
306288
Gammaproteobacteria
GCC
Gly
>WENV170964436
MRWG01011611
306288
Gammaproteobacteria
GCC
Gly
>WENV170964216
MRWG01005084
306288
Gammaproteobacteria
GCC
Gly
>WENV170962997
MRWG01000001
306288
Gammaproteobacteria
GCC
Gly
>WENV170964840
MRWG01055168
176664
Gammaproteobacteria
CCT
Arg
>WENV170964126
MRWG01003475
176664
Gammaproteobacteria
CCT
Arg
>WENV170963996
MRWG01001813
176664
Gammaproteobacteria
CCT
Arg
>WENV170963781
MRWG01000752
176664
Gammaproteobacteria
CCT
Arg
>WENV170963712
MRWG01000574
177028
Gammaproteobacteria
CAT
Met
>WENV170964744
MRWG01037633
176301
Gammaproteobacteria
GAT
Ile
>WENV170964589
MRWG01021414
176301
Gammaproteobacteria
GAT
Ile
>WENV170964549
MRWG01018046
176301
Gammaproteobacteria
GAT
Ile
>WENV170964500
MRWG01015242
176301
Gammaproteobacteria
GAT
Ile
>WENV170964476
MRWG01014096
176301
Gammaproteobacteria
GAT
Ile
>WENV170964392
MRWG01009845
176301
Gammaproteobacteria
GAT
Ile
>WENV170964848
MRWG01058515
176301
Gammaproteobacteria
GAT
Ile
>WENV170964169
MRWG01004316
141058
Gammaproteobacteria
GTA
Tyr
>WENV170963361
MRWG01000132
34537
Gammaproteobacteria
GGA
Ser
>WENV170964873
MRWG01063020
176665
Gammaproteobacteria
CGG
Pro
>WENV170964356
MRWG01008956
176665
Gammaproteobacteria
CGG
Pro
>WENV170964332
MRWG01008330
176665
Gammaproteobacteria
CGG
Pro
>WENV170963515
MRWG01000247
283964
Gammaproteobacteria
TTT
Lys
>WENV170964754
MRWG01039488
23169
Gammaproteobacteria
GGA
Ser
>WENV170963640
MRWG01000414
201377
Gammaproteobacteria
TGG
Pro
>WENV170964027
MRWG01002141
201377
Gammaproteobacteria
TGG
Pro
>WENV170964067
MRWG01002642
201377
Gammaproteobacteria
TGG
Pro
>WENV170964525
MRWG01016140
201377
Gammaproteobacteria
TGG
Pro
>WENV170963340
MRWG01000112
176518
Gammaproteobacteria
CAT
Met
>WENV170963459
MRWG01000200
185059
Gammaproteobacteria
GTC
Asp
>WENV170964171
MRWG01004316
296808
Gammaproteobacteria
GGT
Thr
>WENV170964611
MRWG01023321
296808
Gammaproteobacteria
GGT
Thr
>WENV170964069
MRWG01002642
281283
Gammaproteobacteria
GTG
His
>WENV170964527
MRWG01016140
281283
Gammaproteobacteria
GTG
His
>WENV170963335
MRWG01000111
300318
Gammaproteobacteria
GGC
Ala
>WENV170964723
MRWG01034782
300318
Gammaproteobacteria
GGC
Ala
>WENV170964960
MRWG01088275
176478
Gammaproteobacteria
CAT
Met
>WENV170964620
MRWG01024172
176478
Gammaproteobacteria
CAT
Met
>WENV170964602
MRWG01022475
176478
Gammaproteobacteria
CAT
Met
>WENV170964279
MRWG01006720
176478
Gammaproteobacteria
CAT
Met
>WENV170963476
MRWG01000209
186591
Gammaproteobacteria
ACG
Arg
>WENV170964726
MRWG01034785
282902
Gammaproteobacteria
TGT
Thr
>WENV170964168
MRWG01004316
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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