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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966409
MTEX01009163
362875
Gammaproteobacteria
GAA
Phe
>WENV170966410
MTEX01009163
362875
Gammaproteobacteria
GAA
Phe
>WENV170966284
MTEX01005824
176044
Gammaproteobacteria
GAC
Val
>WENV170966152
MTEX01003013
189904
Gammaproteobacteria
CCA
Trp
>WENV170966419
MTEX01009367
189904
Gammaproteobacteria
CCA
Trp
>WENV170966232
MTEX01004636
330651
Gammaproteobacteria
TGT
Thr
>WENV170966454
MTEX01010404
480367
Gammaproteobacteria
GCA
Cys
>WENV170966206
MTEX01004266
306827
Gammaproteobacteria
TTT
Lys
>WENV170966404
MTEX01008944
306827
Gammaproteobacteria
TTT
Lys
>WENV170966536
MTEX01012826
73781
Gammaproteobacteria
TAA
Leu
>WENV170966203
MTEX01004037
399050
Gammaproteobacteria
CCT
Arg
>WENV170966080
MTEX01001303
197233
Gammaproteobacteria
CAT
Met
>WENV170966532
MTEX01012805
285363
Gammaproteobacteria
TGT
Thr
>WENV170966258
MTEX01005543
29399
Gammaproteobacteria
GGA
Ser
>WENV170966556
MTEX01013444
176520
Gammaproteobacteria
CAT
Met
>WENV170966106
MTEX01001593
284693
Gammaproteobacteria
TTC
Glu
>WENV170966299
MTEX01006381
284693
Gammaproteobacteria
TTC
Glu
>WENV170966301
MTEX01006381
284693
Gammaproteobacteria
TTC
Glu
>WENV170966303
MTEX01006381
284693
Gammaproteobacteria
TTC
Glu
>WENV170966288
MTEX01006017
400267
Gammaproteobacteria
CTG
Gln
>WENV170966334
MTEX01006726
400267
Gammaproteobacteria
CTG
Gln
>WENV170966100
MTEX01001385
99868
Gammaproteobacteria
TAA
Leu
>WENV170966421
MTEX01009381
99868
Gammaproteobacteria
TAA
Leu
>WENV170966321
MTEX01006567
280882
Gammaproteobacteria
GTG
His
>WENV170966435
MTEX01009914
9062
Gammaproteobacteria
GCT
Ser
>WENV170966286
MTEX01005893
176627
Gammaproteobacteria
CCG
Arg
>WENV170966475
MTEX01011207
176627
Gammaproteobacteria
CCG
Arg
>WENV170966101
MTEX01001412
74339
Gammaproteobacteria
GAG
Leu
>WENV170966208
MTEX01004307
184451
Gammaproteobacteria
CAT
Met
>WENV170966403
MTEX01008898
63595
Gammaproteobacteria
TGA
Ser
>WENV170966199
MTEX01003900
73827
Gammaproteobacteria
CAG
Leu
>WENV170966163
MTEX01003512
184266
Gammaproteobacteria
GAC
Val
>WENV170966497
MTEX01011931
184266
Gammaproteobacteria
GAC
Val
>WENV170966535
MTEX01012826
508107
Gammaproteobacteria
GCA
Cys
>WENV170966078
MTEX01001270
56108
Gammaproteobacteria
TGA
Ser
>WENV170966305
MTEX01006381
56340
Gammaproteobacteria
GGA
Ser
>WENV170966135
MTEX01002489
176244
Gammaproteobacteria
TGG
Pro
>WENV170966198
MTEX01003891
176241
Gammaproteobacteria
CGG
Pro
>WENV170966378
MTEX01008265
176241
Gammaproteobacteria
CGG
Pro
>WENV170966317
MTEX01006512
118322
Gammaproteobacteria
TAA
Leu
>WENV170966160
MTEX01003404
242775
Gammaproteobacteria
TGG
Pro
>WENV170966400
MTEX01008650
205770
Gammaproteobacteria
ACG
Arg
>WENV170966398
MTEX01008650
20472
Gammaproteobacteria
GCT
Ser
>WENV170966273
MTEX01005682
29777
Gammaproteobacteria
GGA
Ser
>WENV170966433
MTEX01009848
178550
Gammaproteobacteria
ACG
Arg
>WENV170966059
MTEX01000309
20228
Gammaproteobacteria
GCT
Ser
>WENV170966355
MTEX01007460
236619
Gammaproteobacteria
GTC
Asp
>WENV170966357
MTEX01007460
236619
Gammaproteobacteria
GTC
Asp
>WENV170966572
MTEX01014262
117930
Gammaproteobacteria
CAA
Leu
>WENV170966568
MTEX01013856
208907
Gammaproteobacteria
ACG
Arg
>WENV170966053
MTEX01000156
179074
Gammaproteobacteria
CCT
Arg
>WENV170966239
MTEX01004874
139332
Gammaproteobacteria
CAG
Leu
>WENV170966282
MTEX01005789
118321
Gammaproteobacteria
TAG
Leu
>WENV170966042
MTEX01000012
295821
Gammaproteobacteria
TGT
Thr
>WENV170966212
MTEX01004307
295821
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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