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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180297474
OBJA01034467
423320
Bacillota
>WENV180298957
OBJA01826468
402928
Bacillota
GCC
Gly
>WENV180297682
OBJA01061895
296941
Bacillota
TGC
Ala
>WENV180297476
OBJA01034467
195149
Bacillota
GTC
Asp
>WENV180296206
OBJA01000063
283304
Bacillota
GAA
Phe
>WENV180298994
OBJA01859882
288020
Bacillota
TTG
Gln
>WENV180298291
OBJA01255370
482449
Bacillota
TCC
Gly
>WENV180298024
OBJA01142998
403079
Bacillota
GCC
Gly
>WENV180297473
OBJA01034467
402718
Bacillota
GTT
Asn
>WENV180298630
OBJA01484333
402957
Bacillota
GTT
Asn
>WENV180296223
OBJA01000101
494338
Bacillota
CCA
Trp
>WENV180298791
OBJA01616758
283216
Bacillota
CCG
Arg
>WENV180297742
OBJA01076313
287321
Bacillota
TGC
Ala
>WENV180298970
OBJA01842978
281271
Bacillota
TGC
Ala
>WENV180297944
OBJA01120491
298260
Bacillota
GTT
Asn
>WENV180296225
OBJA01000101
317820
Bacillota
TAC
Val
>WENV180296152
OBJA01000019
317820
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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