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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180342652
OBLJ01074296
201159
Actinomycetota
CAT
Met
>WENV180342824
OBLJ01148599
307132
Actinomycetota
ACG
Arg
>WENV180342360
OBLJ01010326
101065
Actinomycetota
CAG
Leu
>WENV180342820
OBLJ01147740
178316
Actinomycetota
CGG
Pro
>WENV180342445
OBLJ01020564
161735
Actinomycetota
GTC
Asp
>WENV180342816
OBLJ01145518
179771
Actinomycetota
GAT
Ile
>WENV180342358
OBLJ01009706
176510
Actinomycetota
CAT
Met
>WENV180342324
OBLJ01005687
429609
Actinomycetota
GCA
Cys
>WENV180342249
OBLJ01001895
217419
Actinomycetota
CGC
Ala
>WENV180342232
OBLJ01001537
284585
Actinomycetota
CTT
Lys
>WENV180343032
OBLJ01252050
283932
Actinomycetota
GCC
Gly
>WENV180342354
OBLJ01009474
281008
Actinomycetota
GCC
Gly
>WENV180343098
OBLJ01289493
284714
Actinomycetota
>WENV180342251
OBLJ01001910
284586
Actinomycetota
CTC
Glu
>WENV180342444
OBLJ01020564
285912
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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