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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
123 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181458007
OGEJ01000161
180990
Bacillota
CGG
Pro
>WENV181457961
OGEJ01000090
401879
Bacillota
TTG
Gln
>WENV181457974
OGEJ01000099
401879
Bacillota
TTG
Gln
>WENV181458266
OGEJ01004418
99852
Bacillota
GTA
Tyr
>WENV181458387
OGEJ01012430
280500
Bacillota
TGC
Ala
>WENV181458343
OGEJ01008942
74057
Bacillota
CAG
Leu
>WENV181458197
OGEJ01002114
405363
Bacillota
GCA
Cys
>WENV181457975
OGEJ01000099
487072
Bacillota
GCA
Cys
>WENV181458170
OGEJ01001582
280428
Bacillota
GAA
Phe
>WENV181457987
OGEJ01000120
408526
Bacillota
GCA
Cys
>WENV181457976
OGEJ01000099
56397
Bacillota
CAA
Leu
>WENV181458017
OGEJ01000188
56397
Bacillota
CAA
Leu
>WENV181458000
OGEJ01000161
285945
Bacillota
TTT
Lys
>WENV181458444
OGEJ01029844
285565
Bacillota
CTG
Gln
>WENV181458396
OGEJ01013717
296855
Bacillota
GGT
Thr
>WENV181458001
OGEJ01000161
281413
Bacillota
TGT
Thr
>WENV181458020
OGEJ01000194
48505
Bacillota
TGA
Ser
>WENV181458063
OGEJ01000325
48505
Bacillota
TGA
Ser
>WENV181458232
OGEJ01002794
48505
Bacillota
TGA
Ser
>WENV181458077
OGEJ01000409
302145
Bacillota
GAA
Phe
>WENV181458168
OGEJ01001582
280466
Bacillota
TAC
Val
>WENV181458418
OGEJ01018558
183994
Bacillota
TCT
Arg
>WENV181458212
OGEJ01002422
175842
Bacillota
CAC
Val
>WENV181458309
OGEJ01006311
29930
Bacillota
GGA
Ser
>WENV181458158
OGEJ01001439
289717
Bacillota
CTT
Lys
>WENV181458129
OGEJ01000863
289717
Bacillota
CTT
Lys
>WENV181458062
OGEJ01000306
289717
Bacillota
CTT
Lys
>WENV181458109
OGEJ01000697
405874
Bacillota
TTC
Glu
>WENV181457882
OGEJ01000014
407852
Bacillota
TTC
Glu
>WENV181458222
OGEJ01002612
179176
Bacillota
ACG
Arg
>WENV181458061
OGEJ01000305
20932
Bacillota
GCT
Ser
>WENV181457885
OGEJ01000014
285947
Bacillota
CTG
Gln
>WENV181457985
OGEJ01000120
291553
Bacillota
GAA
Phe
>WENV181457932
OGEJ01000054
283493
Bacillota
CTC
Glu
>WENV181458131
OGEJ01000867
190476
Bacillota
CAT
Met
>WENV181458448
OGEJ01031436
285564
Bacillota
GTT
Asn
>WENV181458060
OGEJ01000300
82124
Bacillota
TAA
Leu
>WENV181458443
OGEJ01029218
421660
Bacillota
TTC
Glu
>WENV181458359
OGEJ01010157
20942
Bacillota
GGA
Ser
>WENV181458070
OGEJ01000375
20942
Bacillota
GGA
Ser
>WENV181458252
OGEJ01003816
280447
Bacillota
GAC
Val
>WENV181458200
OGEJ01002200
5692
Bacillota
GCT
Ser
>WENV181457877
OGEJ01000014
284101
Bacillota
GTC
Asp
>WENV181457884
OGEJ01000014
284101
Bacillota
GTC
Asp
>WENV181458118
OGEJ01000765
284723
Bacillota
TAC
Val
>WENV181457886
OGEJ01000014
180991
Bacillota
TCT
Arg
>WENV181458422
OGEJ01020320
487804
Bacillota
GGT
Thr
>WENV181457962
OGEJ01000090
46953
Bacillota
AAG
Leu
>WENV181458031
OGEJ01000254
175859
Bacillota
TCT
Arg
>WENV181457973
OGEJ01000099
285949
Bacillota
GTG
His
>WENV181458172
OGEJ01001609
21311
Bacillota
GCT
Ser
>WENV181458127
OGEJ01000853
175831
Bacillota
ACG
Arg
>WENV181458397
OGEJ01013717
184495
Bacillota
CAT
Met
>WENV181458228
OGEJ01002734
141202
Bacillota
CAA
Leu
>WENV181458399
OGEJ01013784
56690
Bacillota
AAG
Leu
>WENV181458393
OGEJ01013717
332181
Bacillota
TGT
Thr
>WENV181457875
OGEJ01000014
9377
Bacillota
TGA
Ser
>WENV181458153
OGEJ01001320
47166
Bacillota
CGA
Ser
>WENV181458218
OGEJ01002550
284627
Bacillota
GAA
Phe
>WENV181458231
OGEJ01002786
289147
Bacillota
GTT
Asn
>WENV181458255
OGEJ01003839
178152
Bacillota
GTT
Asn
>WENV181458370
OGEJ01010560
180701
Bacillota
TCT
Arg
>WENV181457980
OGEJ01000112
285946
Bacillota
GGT
Thr
>WENV181457968
OGEJ01000099
327598
Bacillota
CTT
Lys
>WENV181457969
OGEJ01000099
327598
Bacillota
CTT
Lys
>WENV181458083
OGEJ01000441
285948
Bacillota
CGT
Thr
>WENV181457941
OGEJ01000068
180992
Bacillota
CCT
Arg
>WENV181458203
OGEJ01002299
289713
Bacillota
TGT
Thr
>WENV181458452
OGEJ01032344
73624
Bacillota
CAA
Leu
>WENV181458122
OGEJ01000789
404091
Bacillota
TTG
Gln
>WENV181458296
OGEJ01005463
175868
Bacillota
GTT
Asn
>WENV181458121
OGEJ01000789
289716
Bacillota
GTG
His
>WENV181458362
OGEJ01010236
119278
Bacillota
TAG
Leu
>WENV181458295
OGEJ01005463
398854
Bacillota
CTC
Glu
>WENV181458022
OGEJ01000198
291576
Bacillota
CCC
Gly
>WENV181457893
OGEJ01000017
20648
Bacillota
CGA
Ser
>WENV181458141
OGEJ01001120
323864
Bacillota
TGC
Ala
>WENV181458347
OGEJ01009346
175911
Bacillota
GTC
Asp
>WENV181458240
OGEJ01003069
480337
Bacillota
TCC
Gly
>WENV181458206
OGEJ01002373
292374
Bacillota
TGC
Ala
>WENV181458405
OGEJ01015473
400600
Bacillota
TTG
Gln
>WENV181458073
OGEJ01000399
404126
Bacillota
GCC
Gly
>WENV181458456
OGEJ01035429
398857
Bacillota
TTC
Glu
>WENV181458273
OGEJ01004530
280444
Bacillota
GGT
Thr
>WENV181458149
OGEJ01001199
119459
Bacillota
TAG
Leu
>WENV181457892
OGEJ01000017
481771
Bacillota
CCC
Gly
>WENV181457972
OGEJ01000099
480918
Bacillota
>WENV181458134
OGEJ01000896
483485
Bacillota
CCC
Gly
>WENV181458167
OGEJ01001582
321753
Bacillota
GCC
Gly
>WENV181458290
OGEJ01005086
179755
Bacillota
CCG
Arg
>WENV181457984
OGEJ01000120
280547
Bacillota
GTC
Asp
>WENV181458342
OGEJ01008942
401689
Bacillota
CCG
Arg
>WENV181457878
OGEJ01000014
283492
Bacillota
GAA
Phe
>WENV181457970
OGEJ01000099
283719
Bacillota
GAA
Phe
>WENV181458300
OGEJ01005813
289154
Bacillota
CTT
Lys
>WENV181458123
OGEJ01000789
289761
Bacillota
TTT
Lys
>WENV181457960
OGEJ01000090
105208
Bacillota
GTA
Tyr
>WENV181457971
OGEJ01000099
105208
Bacillota
GTA
Tyr
>WENV181458132
OGEJ01000867
398832
Bacillota
TTC
Glu
>WENV181458059
OGEJ01000300
118669
Bacillota
GTA
Tyr
>WENV181457887
OGEJ01000014
74129
Bacillota
CAG
Leu
>WENV181458004
OGEJ01000161
178962
Bacillota
ACG
Arg
>WENV181458005
OGEJ01000161
178962
Bacillota
ACG
Arg
>WENV181458260
OGEJ01003998
289715
Bacillota
TAC
Val
>WENV181458058
OGEJ01000295
280476
Bacillota
TTT
Lys
>WENV181458177
OGEJ01001684
20943
Bacillota
CGA
Ser
>WENV181458035
OGEJ01000262
20943
Bacillota
CGA
Ser
>WENV181457881
OGEJ01000014
21320
Bacillota
GCT
Ser
>WENV181458205
OGEJ01002373
201856
Bacillota
GAT
Ile
>WENV181458451
OGEJ01032344
481152
Bacillota
GCA
Cys
>WENV181458239
OGEJ01003069
208539
Bacillota
TGG
Pro
>WENV181458241
OGEJ01003069
184539
Bacillota
TCT
Arg
>WENV181458376
OGEJ01010949
298260
Bacillota
GTT
Asn
>WENV181458135
OGEJ01000924
183995
Bacillota
GGG
Pro
>WENV181458144
OGEJ01001186
175857
Bacillota
GTG
His
>WENV181458154
OGEJ01001381
398833
Bacillota
TGT
Thr
>WENV181458107
OGEJ01000697
403766
Bacillota
TTG
Gln
>WENV181458272
OGEJ01004530
175849
Bacillota
GTC
Asp
>WENV181458169
OGEJ01001582
175849
Bacillota
GTC
Asp
>WENV181458074
OGEJ01000399
489283
Bacillota
GCA
Cys
>WENV181458292
OGEJ01005234
280486
Bacillota
TGC
Ala
>WENV181458450
OGEJ01032344
156219
Bacillota
GTG
His
>WENV181458199
OGEJ01002200
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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