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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181515847
OGGW01037716
99852
Bacillota
GTA
Tyr
>WENV181515757
OGGW01019924
176033
Bacillota
CAT
Met
>WENV181515784
OGGW01025365
403905
Bacillota
GTT
Asn
>WENV181515817
OGGW01030236
280500
Bacillota
TGC
Ala
>WENV181515831
OGGW01034529
280500
Bacillota
TGC
Ala
>WENV181515539
OGGW01005616
405363
Bacillota
GCA
Cys
>WENV181515891
OGGW01053709
184537
Bacillota
ACG
Arg
>WENV181515170
OGGW01000968
280428
Bacillota
GAA
Phe
>WENV181514773
OGGW01000005
291579
Bacillota
GAA
Phe
>WENV181515098
OGGW01000655
180107
Bacillota
TCT
Arg
>WENV181515168
OGGW01000946
175842
Bacillota
CAC
Val
>WENV181515716
OGGW01016122
184216
Bacillota
TTT
Lys
>WENV181515470
OGGW01004147
29930
Bacillota
GGA
Ser
>WENV181515712
OGGW01015596
289395
Bacillota
TTT
Lys
>WENV181515455
OGGW01003703
289717
Bacillota
CTT
Lys
>WENV181515505
OGGW01004728
20932
Bacillota
GCT
Ser
>WENV181515198
OGGW01001093
20932
Bacillota
GCT
Ser
>WENV181515439
OGGW01003354
291553
Bacillota
GAA
Phe
>WENV181515736
OGGW01018045
184217
Bacillota
TCT
Arg
>WENV181515510
OGGW01004806
482593
Bacillota
CCC
Gly
>WENV181515527
OGGW01005375
20942
Bacillota
GGA
Ser
>WENV181515468
OGGW01004135
73664
Bacillota
CAG
Leu
>WENV181515507
OGGW01004794
280447
Bacillota
GAC
Val
>WENV181514899
OGGW01000111
5692
Bacillota
GCT
Ser
>WENV181515759
OGGW01019924
184171
Bacillota
CAT
Met
>WENV181515687
OGGW01012630
186123
Bacillota
GTC
Asp
>WENV181515652
OGGW01011096
184215
Bacillota
GAT
Ile
>WENV181515471
OGGW01004153
47161
Bacillota
>WENV181515364
OGGW01002285
73009
Bacillota
CAG
Leu
>WENV181515105
OGGW01000675
73009
Bacillota
CAG
Leu
>WENV181515714
OGGW01015596
289393
Bacillota
GCC
Gly
>WENV181515882
OGGW01051025
280646
Bacillota
TGC
Ala
>WENV181515340
OGGW01002035
291581
Bacillota
CGG
Pro
>WENV181515381
OGGW01002442
175859
Bacillota
TCT
Arg
>WENV181515149
OGGW01000872
175831
Bacillota
ACG
Arg
>WENV181515679
OGGW01012239
184495
Bacillota
CAT
Met
>WENV181515744
OGGW01019562
289400
Bacillota
CCT
Arg
>WENV181515625
OGGW01009640
141202
Bacillota
CAA
Leu
>WENV181515441
OGGW01003357
141202
Bacillota
CAA
Leu
>WENV181515383
OGGW01002459
141202
Bacillota
CAA
Leu
>WENV181514772
OGGW01000005
187589
Bacillota
CAT
Met
>WENV181515715
OGGW01015596
289394
Bacillota
ACG
Arg
>WENV181515239
OGGW01001321
179810
Bacillota
TCT
Arg
>WENV181515406
OGGW01002798
284627
Bacillota
GAA
Phe
>WENV181515688
OGGW01012630
291634
Bacillota
GAA
Phe
>WENV181515436
OGGW01003340
294020
Bacillota
TAC
Val
>WENV181515775
OGGW01022618
481760
Bacillota
TCC
Gly
>WENV181515661
OGGW01011918
293309
Bacillota
GTT
Asn
>WENV181515618
OGGW01009392
293309
Bacillota
GTT
Asn
>WENV181515416
OGGW01003077
293309
Bacillota
GTT
Asn
>WENV181515813
OGGW01029852
289713
Bacillota
TGT
Thr
>WENV181515675
OGGW01012239
289713
Bacillota
TGT
Thr
>WENV181515413
OGGW01002844
404091
Bacillota
TTG
Gln
>WENV181515339
OGGW01002035
480322
Bacillota
CTG
Gln
>WENV181515036
OGGW01000457
480322
Bacillota
CTG
Gln
>WENV181515504
OGGW01004705
175868
Bacillota
GTT
Asn
>WENV181515412
OGGW01002844
289716
Bacillota
GTG
His
>WENV181515750
OGGW01019924
119278
Bacillota
TAG
Leu
>WENV181515713
OGGW01015596
280999
Bacillota
TGT
Thr
>WENV181515503
OGGW01004705
398854
Bacillota
CTC
Glu
>WENV181515368
OGGW01002361
291576
Bacillota
CCC
Gly
>WENV181515221
OGGW01001221
287280
Bacillota
TGT
Thr
>WENV181515702
OGGW01014010
480324
Bacillota
TTG
Gln
>WENV181515711
OGGW01015596
280992
Bacillota
TAC
Val
>WENV181515704
OGGW01014077
73638
Bacillota
AAG
Leu
>WENV181515641
OGGW01010715
480337
Bacillota
TCC
Gly
>WENV181515789
OGGW01025790
186051
Bacillota
GAT
Ile
>WENV181514965
OGGW01000234
398857
Bacillota
TTC
Glu
>WENV181515722
OGGW01016394
280444
Bacillota
GGT
Thr
>WENV181515865
OGGW01044120
119459
Bacillota
TAG
Leu
>WENV181515786
OGGW01025713
403908
Bacillota
TCC
Gly
>WENV181515653
OGGW01011096
283757
Bacillota
TGC
Ala
>WENV181515192
OGGW01001071
179755
Bacillota
CCG
Arg
>WENV181515438
OGGW01003354
280547
Bacillota
GTC
Asp
>WENV181515424
OGGW01003157
289761
Bacillota
TTT
Lys
>WENV181514889
OGGW01000109
46835
Bacillota
TAA
Leu
>WENV181515322
OGGW01001940
398832
Bacillota
TTC
Glu
>WENV181515271
OGGW01001474
398832
Bacillota
TTC
Glu
>WENV181515673
OGGW01011970
118669
Bacillota
GTA
Tyr
>WENV181514888
OGGW01000109
175915
Bacillota
GTC
Asp
>WENV181515867
OGGW01045103
283367
Bacillota
GCC
Gly
>WENV181515841
OGGW01036837
294275
Bacillota
TGC
Ala
>WENV181515663
OGGW01011918
289715
Bacillota
TAC
Val
>WENV181515620
OGGW01009392
289715
Bacillota
TAC
Val
>WENV181515426
OGGW01003157
289715
Bacillota
TAC
Val
>WENV181515418
OGGW01003077
289715
Bacillota
TAC
Val
>WENV181514774
OGGW01000005
280476
Bacillota
TTT
Lys
>WENV181515496
OGGW01004479
20943
Bacillota
CGA
Ser
>WENV181515482
OGGW01004249
289123
Bacillota
GGT
Thr
>WENV181515746
OGGW01019781
403909
Bacillota
CTG
Gln
>WENV181515642
OGGW01010715
184539
Bacillota
TCT
Arg
>WENV181515873
OGGW01047013
285756
Bacillota
GCC
Gly
>WENV181515478
OGGW01004196
175849
Bacillota
GTC
Asp
>WENV181515525
OGGW01005294
405393
Bacillota
GCC
Gly
>WENV181514898
OGGW01000111
56074
Bacillota
TGA
Ser
>WENV181515247
OGGW01001338
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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