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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
123 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181868907
OGWX01003807
99852
Bacillota
GTA
Tyr
>WENV181868856
OGWX01003141
404076
Bacillota
GCC
Gly
>WENV181868829
OGWX01002758
184504
Bacillota
GTC
Asp
>WENV181869089
OGWX01007432
405363
Bacillota
GCA
Cys
>WENV181868386
OGWX01000131
289472
Bacillota
TTC
Glu
>WENV181868406
OGWX01000157
289472
Bacillota
TTC
Glu
>WENV181869403
OGWX01038524
291579
Bacillota
GAA
Phe
>WENV181868322
OGWX01000035
424998
Bacillota
GCC
Gly
>WENV181869014
OGWX01005367
141454
Bacillota
TAG
Leu
>WENV181869008
OGWX01005367
480359
Bacillota
TCC
Gly
>WENV181869122
OGWX01008813
280644
Bacillota
CCA
Trp
>WENV181868953
OGWX01004626
280466
Bacillota
TAC
Val
>WENV181868742
OGWX01001682
284746
Bacillota
CTG
Gln
>WENV181868654
OGWX01001158
183994
Bacillota
TCT
Arg
>WENV181869454
OGWX01061354
280492
Bacillota
CTT
Lys
>WENV181869012
OGWX01005367
418726
Bacillota
TGT
Thr
>WENV181868666
OGWX01001199
175842
Bacillota
CAC
Val
>WENV181868639
OGWX01001115
175842
Bacillota
CAC
Val
>WENV181869398
OGWX01038267
280639
Bacillota
TTT
Lys
>WENV181868814
OGWX01002480
184497
Bacillota
GGG
Pro
>WENV181868495
OGWX01000419
184497
Bacillota
GGG
Pro
>WENV181869009
OGWX01005367
298270
Bacillota
TAC
Val
>WENV181869120
OGWX01008813
176018
Bacillota
CAT
Met
>WENV181869007
OGWX01005367
398915
Bacillota
TTC
Glu
>WENV181869303
OGWX01023957
179176
Bacillota
ACG
Arg
>WENV181868517
OGWX01000478
179176
Bacillota
ACG
Arg
>WENV181868520
OGWX01000482
101000
Bacillota
GTA
Tyr
>WENV181869198
OGWX01012480
295166
Bacillota
TGC
Ala
>WENV181868575
OGWX01000760
295166
Bacillota
TGC
Ala
>WENV181868432
OGWX01000207
404079
Bacillota
CAT
Met
>WENV181868505
OGWX01000447
176014
Bacillota
TCT
Arg
>WENV181868722
OGWX01001595
184522
Bacillota
CCT
Arg
>WENV181868952
OGWX01004626
399153
Bacillota
TTC
Glu
>WENV181869015
OGWX01005367
398916
Bacillota
>WENV181869399
OGWX01038267
480360
Bacillota
GCA
Cys
>WENV181868665
OGWX01001199
5692
Bacillota
GCT
Ser
>WENV181868539
OGWX01000544
47207
Bacillota
TGA
Ser
>WENV181868572
OGWX01000748
186123
Bacillota
GTC
Asp
>WENV181868599
OGWX01000921
73009
Bacillota
CAG
Leu
>WENV181868812
OGWX01002463
481217
Bacillota
GCA
Cys
>WENV181868720
OGWX01001566
481217
Bacillota
GCA
Cys
>WENV181869003
OGWX01005367
280646
Bacillota
TGC
Ala
>WENV181868523
OGWX01000482
183993
Bacillota
CAT
Met
>WENV181869094
OGWX01007505
407726
Bacillota
CTG
Gln
>WENV181868624
OGWX01001025
407726
Bacillota
CTG
Gln
>WENV181869157
OGWX01010319
291581
Bacillota
CGG
Pro
>WENV181869215
OGWX01013762
175859
Bacillota
TCT
Arg
>WENV181869423
OGWX01043657
398835
Bacillota
GCC
Gly
>WENV181869016
OGWX01005367
330433
Bacillota
GTG
His
>WENV181868522
OGWX01000482
289149
Bacillota
GGT
Thr
>WENV181869011
OGWX01005367
280641
Bacillota
GTT
Asn
>WENV181869086
OGWX01007365
21311
Bacillota
GCT
Ser
>WENV181868416
OGWX01000177
21311
Bacillota
GCT
Ser
>WENV181869158
OGWX01010334
175831
Bacillota
ACG
Arg
>WENV181869006
OGWX01005367
324137
Bacillota
>WENV181868709
OGWX01001511
187589
Bacillota
CAT
Met
>WENV181868614
OGWX01000987
47166
Bacillota
CGA
Ser
>WENV181868511
OGWX01000450
284627
Bacillota
GAA
Phe
>WENV181868403
OGWX01000157
289147
Bacillota
GTT
Asn
>WENV181868710
OGWX01001518
289475
Bacillota
GTG
His
>WENV181868573
OGWX01000748
291634
Bacillota
GAA
Phe
>WENV181868555
OGWX01000706
294020
Bacillota
TAC
Val
>WENV181868580
OGWX01000820
183957
Bacillota
CCT
Arg
>WENV181869236
OGWX01014952
20913
Bacillota
GCT
Ser
>WENV181868999
OGWX01005340
482449
Bacillota
TCC
Gly
>WENV181868990
OGWX01005340
482449
Bacillota
TCC
Gly
>WENV181869401
OGWX01038370
484885
Bacillota
TCC
Gly
>WENV181869156
OGWX01010319
480322
Bacillota
CTG
Gln
>WENV181869070
OGWX01006975
480322
Bacillota
CTG
Gln
>WENV181869020
OGWX01005492
480322
Bacillota
CTG
Gln
>WENV181868478
OGWX01000334
175868
Bacillota
GTT
Asn
>WENV181868652
OGWX01001158
200900
Bacillota
TGG
Pro
>WENV181868320
OGWX01000035
184455
Bacillota
GTC
Asp
>WENV181868324
OGWX01000035
48832
Bacillota
TAA
Leu
>WENV181868477
OGWX01000334
398854
Bacillota
CTC
Glu
>WENV181868867
OGWX01003402
291576
Bacillota
CCC
Gly
>WENV181869411
OGWX01040919
287280
Bacillota
TGT
Thr
>WENV181868490
OGWX01000402
480324
Bacillota
TTG
Gln
>WENV181869321
OGWX01026071
178143
Bacillota
TTC
Glu
>WENV181868387
OGWX01000131
292612
Bacillota
TAC
Val
>WENV181868407
OGWX01000157
292612
Bacillota
TAC
Val
>WENV181868805
OGWX01002399
73638
Bacillota
AAG
Leu
>WENV181869264
OGWX01017874
175911
Bacillota
GTC
Asp
>WENV181868404
OGWX01000157
403952
Bacillota
CTG
Gln
>WENV181868996
OGWX01005340
179935
Bacillota
GTC
Asp
>WENV181868987
OGWX01005340
179935
Bacillota
GTC
Asp
>WENV181868533
OGWX01000516
398857
Bacillota
TTC
Glu
>WENV181868396
OGWX01000146
204381
Bacillota
GAT
Ile
>WENV181869129
OGWX01009138
280444
Bacillota
GGT
Thr
>WENV181868587
OGWX01000855
280444
Bacillota
GGT
Thr
>WENV181868385
OGWX01000131
289745
Bacillota
TTT
Lys
>WENV181868405
OGWX01000157
289745
Bacillota
TTT
Lys
>WENV181869113
OGWX01008569
179755
Bacillota
CCG
Arg
>WENV181868986
OGWX01005333
179755
Bacillota
CCG
Arg
>WENV181868698
OGWX01001395
179755
Bacillota
CCG
Arg
>WENV181868450
OGWX01000244
179755
Bacillota
CCG
Arg
>WENV181868994
OGWX01005340
401111
Bacillota
TTC
Glu
>WENV181869212
OGWX01013523
58120
Bacillota
AAG
Leu
>WENV181868493
OGWX01000412
289154
Bacillota
CTT
Lys
>WENV181869084
OGWX01007259
46835
Bacillota
TAA
Leu
>WENV181868590
OGWX01000859
46835
Bacillota
TAA
Leu
>WENV181868988
OGWX01005340
284742
Bacillota
GAA
Phe
>WENV181868997
OGWX01005340
284742
Bacillota
GAA
Phe
>WENV181868633
OGWX01001090
118669
Bacillota
GTA
Tyr
>WENV181868887
OGWX01003581
280561
Bacillota
CAT
Met
>WENV181868515
OGWX01000466
280476
Bacillota
TTT
Lys
>WENV181869231
OGWX01014620
398852
Bacillota
CTC
Glu
>WENV181868655
OGWX01001158
404085
Bacillota
CCG
Arg
>WENV181868336
OGWX01000048
184539
Bacillota
TCT
Arg
>WENV181869038
OGWX01005936
298260
Bacillota
GTT
Asn
>WENV181868947
OGWX01004543
183995
Bacillota
GGG
Pro
>WENV181868768
OGWX01001970
285601
Bacillota
TTC
Glu
>WENV181868566
OGWX01000725
184523
Bacillota
GAC
Val
>WENV181868906
OGWX01003807
398833
Bacillota
TGT
Thr
>WENV181868711
OGWX01001518
403766
Bacillota
TTG
Gln
>WENV181868586
OGWX01000855
175849
Bacillota
GTC
Asp
>WENV181868323
OGWX01000035
489283
Bacillota
GCA
Cys
>WENV181869296
OGWX01022720
280486
Bacillota
TGC
Ala
>WENV181868310
OGWX01000018
405393
Bacillota
GCC
Gly
>WENV181868664
OGWX01001199
56074
Bacillota
TGA
Ser
>WENV181868669
OGWX01001241
482078
Bacillota
CCC
Gly
>WENV181869193
OGWX01012156
280473
Bacillota
TGG
Pro
>WENV181868773
OGWX01002021
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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