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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182547874
OJBU01000769
296698
Alphaproteobacteria
CGC
Ala
>WENV182547985
OJBU01008033
404641
Alphaproteobacteria
CAC
Val
>WENV182547988
OJBU01008492
400930
Alphaproteobacteria
GAA
Phe
>WENV182547983
OJBU01007808
29841
Alphaproteobacteria
GGA
Ser
>WENV182547978
OJBU01006730
178725
Alphaproteobacteria
GTG
His
>WENV182547882
OJBU01001032
481802
Alphaproteobacteria
TCC
Gly
>WENV182547937
OJBU01003165
76208
Alphaproteobacteria
CAG
Leu
>WENV182547980
OJBU01006981
140893
Alphaproteobacteria
CAA
Leu
>WENV182547883
OJBU01001040
400518
Alphaproteobacteria
GAA
Phe
>WENV182547878
OJBU01000925
178263
Alphaproteobacteria
GTG
His
>WENV182548003
OJBU01012130
100185
Alphaproteobacteria
GAG
Leu
>WENV182547849
OJBU01000318
288727
Alphaproteobacteria
>WENV182547953
OJBU01004220
288727
Alphaproteobacteria
>WENV182547922
OJBU01002069
178731
Alphaproteobacteria
GTC
Asp
>WENV182547863
OJBU01000586
178731
Alphaproteobacteria
GTC
Asp
>WENV182547899
OJBU01001533
282977
Alphaproteobacteria
CAT
Met
>WENV182547919
OJBU01001962
403836
Alphaproteobacteria
>WENV182547942
OJBU01003404
183632
Alphaproteobacteria
GGG
Pro
>WENV182547971
OJBU01005826
140892
Alphaproteobacteria
TAG
Leu
>WENV182547958
OJBU01004889
178509
Alphaproteobacteria
CCT
Arg
>WENV182548005
OJBU01012656
29729
Alphaproteobacteria
GCT
Ser
>WENV182547927
OJBU01002274
400249
Alphaproteobacteria
GCC
Gly
>WENV182547853
OJBU01000437
73167
Alphaproteobacteria
GAG
Leu
>WENV182547964
OJBU01005298
178503
Alphaproteobacteria
GGG
Pro
>WENV182547968
OJBU01005574
29727
Alphaproteobacteria
CGA
Ser
>WENV182547997
OJBU01010125
283510
Alphaproteobacteria
TTT
Lys
>WENV182547890
OJBU01001210
21542
Alphaproteobacteria
GGA
Ser
>WENV182547854
OJBU01000448
400517
Alphaproteobacteria
GGT
Thr
>WENV182547923
OJBU01002085
281650
Alphaproteobacteria
CCA
Trp
>WENV182547871
OJBU01000739
481098
Alphaproteobacteria
CTG
Gln
>WENV182547925
OJBU01002140
190625
Alphaproteobacteria
ACG
Arg
>WENV182547984
OJBU01007904
481326
Alphaproteobacteria
GCA
Cys
>WENV182547829
OJBU01000060
290520
Alphaproteobacteria
TAC
Val
>WENV182547981
OJBU01007304
400515
Alphaproteobacteria
GAC
Val
>WENV182547962
OJBU01005254
399000
Alphaproteobacteria
TTC
Glu
>WENV182547957
OJBU01004811
281676
Alphaproteobacteria
TAC
Val
>WENV182547862
OJBU01000569
282981
Alphaproteobacteria
CCA
Trp
>WENV182547987
OJBU01008402
178784
Alphaproteobacteria
CAT
Met
>WENV182547916
OJBU01001932
480900
Alphaproteobacteria
GCA
Cys
>WENV182547938
OJBU01003173
190609
Alphaproteobacteria
TCT
Arg
>WENV182547979
OJBU01006791
398996
Alphaproteobacteria
GCC
Gly
>WENV182547926
OJBU01002142
13606
Alphaproteobacteria
GCT
Ser
>WENV182547833
OJBU01000098
118150
Alphaproteobacteria
TAG
Leu
>WENV182547935
OJBU01002654
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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