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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183427785
OMBN01000414
180990
Bacillota
CGG
Pro
>WENV183427379
OMBN01000002
283494
Bacillota
GTT
Asn
>WENV183428034
OMBN01002752
118683
Bacillota
GTA
Tyr
>WENV183427502
OMBN01000056
401879
Bacillota
TTG
Gln
>WENV183427503
OMBN01000056
487072
Bacillota
GCA
Cys
>WENV183427380
OMBN01000002
8730
Bacillota
GGA
Ser
>WENV183428343
OMBN01021436
280428
Bacillota
GAA
Phe
>WENV183427504
OMBN01000056
56397
Bacillota
CAA
Leu
>WENV183427778
OMBN01000414
285945
Bacillota
TTT
Lys
>WENV183427682
OMBN01000236
120110
Bacillota
TAG
Leu
>WENV183427780
OMBN01000414
281413
Bacillota
TGT
Thr
>WENV183427616
OMBN01000144
283762
Bacillota
CCT
Arg
>WENV183428255
OMBN01014374
175842
Bacillota
CAC
Val
>WENV183427920
OMBN01001053
184086
Bacillota
GTT
Asn
>WENV183427381
OMBN01000002
407852
Bacillota
TTC
Glu
>WENV183428332
OMBN01020413
179563
Bacillota
GAT
Ile
>WENV183428059
OMBN01003266
179176
Bacillota
ACG
Arg
>WENV183427384
OMBN01000002
285947
Bacillota
CTG
Gln
>WENV183427537
OMBN01000077
481167
Bacillota
GCA
Cys
>WENV183428331
OMBN01020413
295166
Bacillota
TGC
Ala
>WENV183427402
OMBN01000007
283493
Bacillota
CTC
Glu
>WENV183428322
OMBN01019306
180908
Bacillota
CGG
Pro
>WENV183428088
OMBN01004207
73664
Bacillota
CAG
Leu
>WENV183428391
OMBN01028189
5692
Bacillota
GCT
Ser
>WENV183427383
OMBN01000002
284101
Bacillota
GTC
Asp
>WENV183427839
OMBN01000593
280427
Bacillota
TAC
Val
>WENV183428075
OMBN01003607
73009
Bacillota
CAG
Leu
>WENV183428319
OMBN01019306
118297
Bacillota
TAG
Leu
>WENV183427377
OMBN01000002
180991
Bacillota
TCT
Arg
>WENV183428405
OMBN01033369
487804
Bacillota
GGT
Thr
>WENV183428132
OMBN01005809
481217
Bacillota
GCA
Cys
>WENV183428180
OMBN01008529
288819
Bacillota
GTG
His
>WENV183427698
OMBN01000253
46953
Bacillota
AAG
Leu
>WENV183427382
OMBN01000002
302092
Bacillota
TAC
Val
>WENV183427501
OMBN01000056
285949
Bacillota
GTG
His
>WENV183427715
OMBN01000269
283760
Bacillota
GGT
Thr
>WENV183428069
OMBN01003367
284627
Bacillota
GAA
Phe
>WENV183428151
OMBN01006993
178152
Bacillota
GTT
Asn
>WENV183427798
OMBN01000443
284016
Bacillota
CTT
Lys
>WENV183427574
OMBN01000104
285946
Bacillota
GGT
Thr
>WENV183427497
OMBN01000056
332864
Bacillota
CTT
Lys
>WENV183427498
OMBN01000056
332864
Bacillota
CTT
Lys
>WENV183427763
OMBN01000362
20460
Bacillota
GCT
Ser
>WENV183427532
OMBN01000072
285948
Bacillota
CGT
Thr
>WENV183427533
OMBN01000072
180992
Bacillota
CCT
Arg
>WENV183428215
OMBN01011881
484885
Bacillota
TCC
Gly
>WENV183428327
OMBN01019535
175868
Bacillota
GTT
Asn
>WENV183427830
OMBN01000560
29760
Bacillota
CGA
Ser
>WENV183428326
OMBN01019535
398854
Bacillota
CTC
Glu
>WENV183427660
OMBN01000209
400614
Bacillota
CCG
Arg
>WENV183427385
OMBN01000002
20648
Bacillota
CGA
Ser
>WENV183427972
OMBN01001537
303718
Bacillota
TGT
Thr
>WENV183427796
OMBN01000442
303718
Bacillota
TGT
Thr
>WENV183427607
OMBN01000135
303718
Bacillota
TGT
Thr
>WENV183427538
OMBN01000077
178972
Bacillota
TCT
Arg
>WENV183427779
OMBN01000414
100512
Bacillota
TAG
Leu
>WENV183427753
OMBN01000335
100225
Bacillota
CAG
Leu
>WENV183427376
OMBN01000002
481771
Bacillota
CCC
Gly
>WENV183427500
OMBN01000056
480918
Bacillota
>WENV183428360
OMBN01024116
483485
Bacillota
CCC
Gly
>WENV183427588
OMBN01000111
20461
Bacillota
GGA
Ser
>WENV183428179
OMBN01008529
482411
Bacillota
CCA
Trp
>WENV183427807
OMBN01000480
73616
Bacillota
CAA
Leu
>WENV183428221
OMBN01012179
223045
Bacillota
GAT
Ile
>WENV183428227
OMBN01012288
127792
Bacillota
TAG
Leu
>WENV183428106
OMBN01004784
198522
Bacillota
GAT
Ile
>WENV183427512
OMBN01000062
283761
Bacillota
CGT
Thr
>WENV183427499
OMBN01000056
105208
Bacillota
GTA
Tyr
>WENV183428407
OMBN01033370
398832
Bacillota
TTC
Glu
>WENV183428082
OMBN01003959
118669
Bacillota
GTA
Tyr
>WENV183427685
OMBN01000236
46821
Bacillota
TAA
Leu
>WENV183427378
OMBN01000002
74129
Bacillota
CAG
Leu
>WENV183427962
OMBN01001423
74812
Bacillota
TAA
Leu
>WENV183427783
OMBN01000414
178962
Bacillota
ACG
Arg
>WENV183428222
OMBN01012179
329074
Bacillota
TGC
Ala
>WENV183427484
OMBN01000050
280483
Bacillota
GAA
Phe
>WENV183427663
OMBN01000210
298260
Bacillota
GTT
Asn
>WENV183427485
OMBN01000050
285756
Bacillota
GCC
Gly
>WENV183428300
OMBN01017886
317820
Bacillota
TAC
Val
>WENV183428395
OMBN01030085
280486
Bacillota
TGC
Ala
>WENV183428373
OMBN01026195
405393
Bacillota
GCC
Gly
>WENV183427511
OMBN01000062
47133
Bacillota
AAG
Leu
>WENV183427974
OMBN01001654
47133
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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