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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615862
OOEC01000039
283283
Gammaproteobacteria
TAC
Val
>WENV183615863
OOEC01000039
283283
Gammaproteobacteria
TAC
Val
>WENV183616239
OOEC01199032
283283
Gammaproteobacteria
TAC
Val
>WENV183615875
OOEC01000134
183784
Gammaproteobacteria
ACG
Arg
>WENV183616004
OOEC01019800
73863
Gammaproteobacteria
CAG
Leu
>WENV183616082
OOEC01053328
290068
Gammaproteobacteria
TTT
Lys
>WENV183615860
OOEC01000010
74416
Gammaproteobacteria
TAA
Leu
>WENV183615899
OOEC01001801
178471
Gammaproteobacteria
GTT
Asn
>WENV183615900
OOEC01001801
178471
Gammaproteobacteria
GTT
Asn
>WENV183615966
OOEC01011073
297790
Gammaproteobacteria
TGC
Ala
>WENV183615858
OOEC01000010
402281
Gammaproteobacteria
GCC
Gly
>WENV183615867
OOEC01000093
402281
Gammaproteobacteria
GCC
Gly
>WENV183616259
OOEC01227998
402281
Gammaproteobacteria
GCC
Gly
>WENV183615897
OOEC01001746
179136
Gammaproteobacteria
GAC
Val
>WENV183615859
OOEC01000010
481678
Gammaproteobacteria
GCA
Cys
>WENV183616061
OOEC01042463
177028
Gammaproteobacteria
CAT
Met
>WENV183615927
OOEC01005749
176301
Gammaproteobacteria
GAT
Ile
>WENV183615965
OOEC01011073
176301
Gammaproteobacteria
GAT
Ile
>WENV183616238
OOEC01198526
176301
Gammaproteobacteria
GAT
Ile
>WENV183616045
OOEC01037326
56623
Gammaproteobacteria
GGA
Ser
>WENV183615870
OOEC01000122
118640
Gammaproteobacteria
TAG
Leu
>WENV183615869
OOEC01000122
190582
Gammaproteobacteria
CAT
Met
>WENV183615997
OOEC01018665
282893
Gammaproteobacteria
TAC
Val
>WENV183615881
OOEC01000449
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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