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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183672171
ORJL011143286
201159
Actinomycetota
CAT
Met
>WENV183672307
ORJL011157199
201159
Actinomycetota
CAT
Met
>WENV183672609
ORJL011190364
201159
Actinomycetota
CAT
Met
>WENV183674977
ORJL011454953
201159
Actinomycetota
CAT
Met
>WENV183674996
ORJL011457162
201159
Actinomycetota
CAT
Met
>WENV183676546
ORJL011639071
201159
Actinomycetota
CAT
Met
>WENV183662889
ORJL010235419
31652
Actinomycetota
CGA
Ser
>WENV183673407
ORJL011273757
31652
Actinomycetota
CGA
Ser
>WENV183675950
ORJL011572589
31652
Actinomycetota
CGA
Ser
>WENV183671068
ORJL011022786
282830
Actinomycetota
CGC
Ala
>WENV183667664
ORJL010670916
316564
Actinomycetota
GGT
Thr
>WENV183660535
ORJL010031164
281498
Actinomycetota
ACG
Arg
>WENV183666283
ORJL010537502
345086
Actinomycetota
ACG
Arg
>WENV183666096
ORJL010519829
298505
Actinomycetota
CTC
Glu
>WENV183665880
ORJL010500101
280575
Actinomycetota
CTC
Glu
>WENV183670541
ORJL010955840
177965
Actinomycetota
GTC
Asp
>WENV183665879
ORJL010500101
400123
Actinomycetota
CTG
Gln
>WENV183670727
ORJL010978315
191488
Actinomycetota
TGG
Pro
>WENV183668867
ORJL010781410
291883
Actinomycetota
CGC
Ala
>WENV183671596
ORJL011078433
291883
Actinomycetota
CGC
Ala
>WENV183669906
ORJL010890501
176402
Actinomycetota
CAA
Leu
>WENV183666095
ORJL010519829
436761
Actinomycetota
CTG
Gln
>WENV183669859
ORJL010885644
447753
Actinomycetota
CCG
Arg
>WENV183674511
ORJL011397392
447753
Actinomycetota
CCG
Arg
>WENV183676590
ORJL011644958
480460
Actinomycetota
GCA
Cys
>WENV183677111
ORJL011712011
46760
Actinomycetota
GAG
Leu
>WENV183661564
ORJL010118884
236563
Actinomycetota
CGG
Pro
>WENV183665789
ORJL010492452
236563
Actinomycetota
CGG
Pro
>WENV183678668
ORJL011909452
236563
Actinomycetota
CGG
Pro
>WENV183669579
ORJL010856686
289635
Actinomycetota
TTC
Glu
>WENV183670392
ORJL010940675
289635
Actinomycetota
TTC
Glu
>WENV183674228
ORJL011363630
289635
Actinomycetota
TTC
Glu
>WENV183668652
ORJL010763043
289636
Actinomycetota
CAA
Leu
>WENV183660914
ORJL010066731
289636
Actinomycetota
CAA
Leu
>WENV183670808
ORJL010987699
289636
Actinomycetota
CAA
Leu
>WENV183660678
ORJL010045006
481421
Actinomycetota
TCC
Gly
>WENV183665467
ORJL010464956
481421
Actinomycetota
TCC
Gly
>WENV183675956
ORJL011573143
481421
Actinomycetota
TCC
Gly
>WENV183674538
ORJL011400305
117785
Actinomycetota
CAA
Leu
>WENV183670699
ORJL010974246
369836
Actinomycetota
CTC
Glu
>WENV183678567
ORJL011893988
490635
Actinomycetota
TCC
Gly
>WENV183666410
ORJL010548685
407330
Actinomycetota
CCG
Arg
>WENV183661430
ORJL010107869
282828
Actinomycetota
GTT
Asn
>WENV183676084
ORJL011586340
214183
Actinomycetota
CGG
Pro
>WENV183675183
ORJL011482904
509147
Actinomycetota
GCA
Cys
>WENV183664283
ORJL010361992
509147
Actinomycetota
GCA
Cys
>WENV183662624
ORJL010211818
281640
Actinomycetota
GTT
Asn
>WENV183674213
ORJL011361813
281640
Actinomycetota
GTT
Asn
>WENV183676507
ORJL011632737
179352
Actinomycetota
GAC
Val
>WENV183668136
ORJL010714557
56136
Actinomycetota
GGA
Ser
>WENV183670073
ORJL010905182
5703
Actinomycetota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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