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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Identical Sequence Group
Metagenomic characterization of a wastewater treatment plant (SRP000180)
[ 100 % ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
1
Tyr
ATA
0
Cys
ACA
0
T
GAA
18
GGA
10
GTA
14
GCA
7
C
Leu
TAA
16
TGA
12
ochre
TTA
0
opal Sec
TCA
4
A
CAA
14
CGA
8
amber
CTA
1
Trp
CCA
13
G
C
Leu
AAG
1
Pro
AGG
0
His
ATG
0
Arg
ACG
9
T
GAG
10
GGG
7
GTG
14
GCG
1
C
TAG
10
TGG
11
Gln
TTG
17
TCG
3
A
CAG
7
CGG
12
CTG
5
CCG
9
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
14
GGT
10
GTT
16
GCT
11
C
TAT
0
TGT
12
Lys
TTT
11
Arg
TCT
15
A
Met
CAT
34
CGT
12
CTT
10
CCT
13
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
9
GGC
7
GTC
16
GCC
9
C
TAC
12
TGC
15
Glu
TTC
18
TCC
11
A
CAC
6
CGC
3
CTC
3
CCC
10
G
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