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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Metagenomic characterization of a wastewater treatment plant (SRP000180)
Anticodon = GGA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.14302 (2 seq.)
>WENV180285197
OBID01272273
[OBID] metagenome; sludge
25
117
+
Ser
GGA
[ENA]
¢þ
>SRA1002099
SRR001308.240540
Metagenomic characterization of a wastewater treatment plant (SRP000180)
160
252
+
Ser
GGA
[SRA]
Identical group No.14303 (2 seq.)
>WENV170650691
JRYE01010391
[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
2473
2381
-
Ser
GGA
[ENA]
¢þ
>SRA1002256
SRR001308.331280
Metagenomic characterization of a wastewater treatment plant (SRP000180)
154
246
+
Ser
GGA
[SRA]
Identical group No.30491 (89 seq.)
>W1710808908
LKDZ01000004
Betaproteobacteria
Variovorax boronicumulans [LKDZ]
49993
50083
+
Ser
GGA
[ENA]
¡û
>W1710821619
LKTU01000002
Betaproteobacteria
Variovorax paradoxus [LKTU]
86107
86017
-
Ser
GGA
[ENA]
¡û
>W1710821684
LKTV01000031
Betaproteobacteria
Variovorax paradoxus [LKTV]
51785
51695
-
Ser
GGA
[ENA]
¡û
>W1710821738
LKTW01000057
Betaproteobacteria
Variovorax paradoxus [LKTW]
24785
24875
+
Ser
GGA
[ENA]
¡û
>W1710821805
LKTX01000108
Betaproteobacteria
Variovorax paradoxus [LKTX]
24806
24896
+
Ser
GGA
[ENA]
¡û
>W1710821858
LKTY01000112
Betaproteobacteria
Variovorax paradoxus [LKTY]
6111
6021
-
Ser
GGA
[ENA]
¡û
>W1710821886
LKTZ01000021
Betaproteobacteria
Variovorax paradoxus [LKTZ]
40195
40285
+
Ser
GGA
[ENA]
¡û
>W1710860125
LMCQ01000003
Betaproteobacteria
Variovorax sp. Root318D1 [LMCQ]
194193
194103
-
Ser
GGA
[ENA]
¡û
>W1710861774
LMDW01000016
Betaproteobacteria
Variovorax sp. Root411 [LMDW]
281221
281131
-
Ser
GGA
[ENA]
¡û
>W1710862501
LMEK01000025
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
13136
13046
-
Ser
GGA
[ENA]
¡û
>W1710863092
LMEV01000017
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
1306104
1306014
-
Ser
GGA
[ENA]
¡û
>W1710873495
LMMV01000006
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
21563
21653
+
Ser
GGA
[ENA]
¡û
>W1711123812
LUJJ01000012
Betaproteobacteria
Variovorax boronicumulans [LUJJ]
67127
67217
+
Ser
GGA
[ENA]
¡û
>W1711386502
MEFM01000022
Betaproteobacteria
Variovorax sp. SCN 67-85 [MEFM]
20946
21036
+
Ser
GGA
[ENA]
¡û
>W1711387496
MEGR01000066
Betaproteobacteria
Variovorax sp. SCN 67-20 [MEGR]
18390
18300
-
Ser
GGA
[ENA]
¡û
>W1711506629
MKWO01000021
Betaproteobacteria
Variovorax sp. 67-131 [MKWO]
527500
527410
-
Ser
GGA
[ENA]
¡û
>W131174634
ARIP01000062
Betaproteobacteria
Variovorax paradoxus 4MFCol3.1 [ARIP]
113430
113520
+
Ser
GGA
[ENA]
¡û
>W131180357
ARNA01000050
Betaproteobacteria
Variovorax paradoxus 110B [ARNA]
488933
489023
+
Ser
GGA
[ENA]
¡û
>WENV180025335
FTIO01002860
[FTIO] metagenome; soil
157
67
-
Ser
GGA
[ENA]
¢þ
>WENV180030100
FTJL01157499
[FTJL] metagenome; soil
123
33
-
Ser
GGA
[ENA]
¢þ
>WENV181364902
OFPF01002105
[OFPF] sediment metagenome; Lake sediment
178
88
-
Ser
GGA
[ENA]
¢þ
>W141170149
AXXG01000005
Betaproteobacteria
Variovorax sp. JGI 0001016-M12 [AXXG]
58460
58550
+
Ser
GGA
[ENA]
¡û
>WENV183735192
PJUA01002273
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
2574
2664
+
Ser
GGA
[ENA]
¢þ
>WENV183735589
PJUB01000104
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
46353
46263
-
Ser
GGA
[ENA]
¢þ
>WENV183736223
PJUC01000166
[PJUC] soil metagenome; Soil enriched on filter paper
20678
20768
+
Ser
GGA
[ENA]
¢þ
>WENV183741530
PJUG01000046
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
97687
97597
-
Ser
GGA
[ENA]
¢þ
>WENV183741901
PJUH01000003
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
37458
37368
-
Ser
GGA
[ENA]
¢þ
>WENV183744418
PJUK01022446
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
123
213
+
Ser
GGA
[ENA]
¢þ
>WENV170559552
CXWL01128430
[CXWL] groundwater metagenome; biofilm material
1763
1853
+
Ser
GGA
[ENA]
¢þ
>WENV170706501
LNAP01003633
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
92
2
-
Ser
GGA
[ENA]
¢þ
>WENV170708460
LNAP01084001
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
828
738
-
Ser
GGA
[ENA]
¢þ
>WENV171003348
NNBT01005764
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
1582
1492
-
Ser
GGA
[ENA]
¢þ
>WENV171003631
NNBU01001113
[NNBU] plant metagenome; symbiotic tissue sample KVJ2
496
586
+
Ser
GGA
[ENA]
¢þ
>WENV171003786
NNBV01000771
[NNBV] plant metagenome; symbiotic tissue sample KVS11
82911
82821
-
Ser
GGA
[ENA]
¢þ
>C181078469
CP023284
Betaproteobacteria
Variovorax boronicumulans J1 [CP023284]
3901149
3901239
+
Ser
GGA
-
¡û
>C181159371
CP027773
Betaproteobacteria
Variovorax sp. PMC12 [CP027773, CP027774]
1288357
1288447
+
Ser
GGA
-
¡û
>W09119923
ACEE01000008
Betaproteobacteria
Variovorax paradoxus S110 [ACEE]
56540
56630
+
Ser
GGA
[ENA]
¡û
>W141558085
JHVQ01000007
Betaproteobacteria
Variovorax sp. URHB0020 [JHVQ]
211987
211897
-
Ser
GGA
[ENA]
¡û
>C141002547
CP003911
Betaproteobacteria
Variovorax paradoxus B4 [CP003911, CP003912]
2987484
2987574
+
Ser
GGA
[Ensembl]
¡û
>W1910792827
MRCN01000008
Betaproteobacteria
Variovorax boronicumulans ACN3 [MRCN]
154487
154577
+
Ser
GGA
[ENA]
¡û
>C09111122
CP001635
Betaproteobacteria
Variovorax paradoxus [CP001635]
2882712
2882622
-
Ser
GGA
[Ensembl]
¡û
>W1911496694
OCMW01000001
Betaproteobacteria
Variovorax sp. YR752 [OCMW]
4084556
4084646
+
Ser
GGA
[ENA]
¡û
>W1911647335
QAJK01000046
Betaproteobacteria
Variovorax sp. KBW07 [QAJK]
66057
66147
+
Ser
GGA
[ENA]
¡û
>W1911775332
QXMN01000036
Betaproteobacteria
Acidovorax cavernicola 1011MAR4D40.2 [QXMN]
24134
24224
+
Ser
GGA
[ENA]
¡û
>SRA1001813
SRR001308.68098
Metagenomic characterization of a wastewater treatment plant (SRP000180)
102
12
-
Ser
GGA
[SRA]
>W1810072207
PEFF01000001
Betaproteobacteria
Variovorax sp. 54 [PEFF]
109858
109948
+
Ser
GGA
[ENA]
¡û
>W1810192721
PKMT01000003
Betaproteobacteria
Variovorax sp. RO1 [PKMT]
456619
456709
+
Ser
GGA
[ENA]
¡û
>W1810486646
QAYA01000001
Betaproteobacteria
Variovorax sp. GV040 [QAYA]
520506
520416
-
Ser
GGA
[ENA]
¡û
>W1810577501
QEOH01000001
Betaproteobacteria
Variovorax sp. GV014 [QEOH]
626031
625941
-
Ser
GGA
[ENA]
¡û
>W1810672517
QJTM01000001
Betaproteobacteria
Variovorax sp. GV035 [QJTM]
520506
520416
-
Ser
GGA
[ENA]
¡û
>W1810676085
QKLT01000001
Betaproteobacteria
Variovorax sp. GV042 [QKLT]
520506
520416
-
Ser
GGA
[ENA]
¡û
>W1810682454
QKUE01000001
Betaproteobacteria
Variovorax sp. GV004 [QKUE]
520506
520416
-
Ser
GGA
[ENA]
¡û
>W1511352953
JROV01000201
Betaproteobacteria
Variovorax paradoxus ZNC0006 [JROV]
3400
3310
-
Ser
GGA
[ENA]
¡û
>C11123612
CP002417
Betaproteobacteria
Variovorax paradoxus EPS [CP002417]
3041957
3041867
-
Ser
GGA
[Ensembl]
¡û
>W1511508930
JXQQ01000033
Betaproteobacteria
Variovorax paradoxus MEDvA23 [JXQQ]
145768
145678
-
Ser
GGA
[ENA]
¡û
>W1511555004
JZWI01000018
Betaproteobacteria
Variovorax paradoxus TBEA6 [JZWI]
46224
46134
-
Ser
GGA
[ENA]
¡û
>W1610072173
BCUS01000095
Betaproteobacteria
Variovorax boronicumulans NBRC 103145 [BCUS]
23878
23968
+
Ser
GGA
[ENA]
¡û
>W1610072227
BCUT01000008
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
109867
109957
+
Ser
GGA
[ENA]
¡û
>W121084965
AKIW01000033
Betaproteobacteria
Variovorax sp. CF313 [AKIW]
180964
181054
+
Ser
GGA
[ENA]
¡û
>W1610685581
LKTU01000002
Betaproteobacteria
Variovorax paradoxus [LKTU]
86107
86017
-
Ser
GGA
[ENA]
¡û
>W1610685646
LKTV01000031
Betaproteobacteria
Variovorax paradoxus [LKTV]
51785
51695
-
Ser
GGA
[ENA]
¡û
>W1610685700
LKTW01000057
Betaproteobacteria
Variovorax paradoxus [LKTW]
24785
24875
+
Ser
GGA
[ENA]
¡û
>W1610685767
LKTX01000108
Betaproteobacteria
Variovorax paradoxus [LKTX]
24806
24896
+
Ser
GGA
[ENA]
¡û
>W1610685820
LKTY01000112
Betaproteobacteria
Variovorax paradoxus [LKTY]
6111
6021
-
Ser
GGA
[ENA]
¡û
>W1610685848
LKTZ01000021
Betaproteobacteria
Variovorax paradoxus [LKTZ]
40195
40285
+
Ser
GGA
[ENA]
¡û
>W1610722471
LMCQ01000003
Betaproteobacteria
Variovorax sp. Root318D1 [LMCQ]
194193
194103
-
Ser
GGA
[ENA]
¡û
>W1610724120
LMDW01000016
Betaproteobacteria
Variovorax sp. Root411 [LMDW]
281221
281131
-
Ser
GGA
[ENA]
¡û
>W1610724847
LMEK01000025
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
13136
13046
-
Ser
GGA
[ENA]
¡û
>W1610725438
LMEV01000017
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
1306104
1306014
-
Ser
GGA
[ENA]
¡û
>W1610735841
LMMV01000006
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
21563
21653
+
Ser
GGA
[ENA]
¡û
>W1710069375
BCUS01000095
Betaproteobacteria
Variovorax boronicumulans NBRC 103145 [BCUS]
23878
23968
+
Ser
GGA
[ENA]
¡û
>W1710069429
BCUT01000008
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
109867
109957
+
Ser
GGA
[ENA]
¡û
>W1710506204
FMUJ01000003
Betaproteobacteria
Variovorax sp. EL159 [FMUJ]
43954
43864
-
Ser
GGA
[ENA]
¡û
>W1710512944
FMZU01000010
Betaproteobacteria
Variovorax sp. CF079 [FMZU]
108555
108645
+
Ser
GGA
[ENA]
¡û
>W1710517963
FNDR01000014
Betaproteobacteria
Variovorax sp. OV700 [FNDR]
89365
89455
+
Ser
GGA
[ENA]
¡û
>W1710530023
FNOL01000005
Betaproteobacteria
Variovorax sp. YR634 [FNOL]
266466
266376
-
Ser
GGA
[ENA]
¡û
>W1710531351
FNPM01000002
Betaproteobacteria
Variovorax sp. YR266 [FNPM]
488220
488310
+
Ser
GGA
[ENA]
¡û
>W1710534004
FNRO01000001
Betaproteobacteria
Variovorax sp. YR216 [FNRO]
376463
376553
+
Ser
GGA
[ENA]
¡û
>W1710538138
FNUI01000006
Betaproteobacteria
Variovorax sp. NFACC28 [FNUI]
285464
285374
-
Ser
GGA
[ENA]
¡û
>W1710539551
FNVM01000006
Betaproteobacteria
Variovorax sp. NFACC29 [FNVM]
207980
208070
+
Ser
GGA
[ENA]
¡û
>W1710542709
FNZJ01000003
Betaproteobacteria
Variovorax sp. OK202 [FNZJ]
276781
276691
-
Ser
GGA
[ENA]
¡û
>W1710545275
FOBJ01000001
Betaproteobacteria
Variovorax sp. YR750 [FOBJ]
468290
468380
+
Ser
GGA
[ENA]
¡û
>W1710554281
FOII01000001
Betaproteobacteria
Variovorax sp. OV084 [FOII]
1014304
1014394
+
Ser
GGA
[ENA]
¡û
>W1710557137
FOKS01000006
Betaproteobacteria
Variovorax sp. NFACC26 [FOKS]
285414
285324
-
Ser
GGA
[ENA]
¡û
>W1710558148
FOLP01000003
Betaproteobacteria
Variovorax sp. OK212 [FOLP]
276727
276637
-
Ser
GGA
[ENA]
¡û
>W1710562243
FOOV01000003
Betaproteobacteria
Variovorax sp. NFACC27 [FOOV]
207982
208072
+
Ser
GGA
[ENA]
¡û
>W1710571860
FOWG01000002
Betaproteobacteria
Variovorax sp. PDC80 [FOWG]
345363
345273
-
Ser
GGA
[ENA]
¡û
>W1710572103
FOWL01000001
Betaproteobacteria
Variovorax sp. OK605 [FOWL]
499052
499142
+
Ser
GGA
[ENA]
¡û
>W1710573290
FOXJ01000001
Betaproteobacteria
Variovorax sp. 770b2 [FOXJ]
1360913
1360823
-
Ser
GGA
[ENA]
¡û
Identical group No.33188 (5 seq.)
>WENV170552940
CXWK01004300
[CXWK] wastewater metagenome; activated sludge
268
178
-
Ser
GGA
[ENA]
¢þ
>WENV170714352
LNFM01069294
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
518
608
+
Ser
GGA
[ENA]
¢þ
>W1910175577
BJCL01000001
Betaproteobacteria
Rubrivivax pictus W35 [BJCL]
728452
728542
+
Ser
GGA
[ENA]
¡û
>W1910700057
MESD01000162
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 [MESD]
10832
10922
+
Ser
GGA
[ENA]
¡û
>SRA1002152
SRR001308.274146
Metagenomic characterization of a wastewater treatment plant (SRP000180)
122
32
-
Ser
GGA
[SRA]
Identical group No.34513 (2 seq.)
>SRA1001842
SRR001308.86628
Metagenomic characterization of a wastewater treatment plant (SRP000180)
39
129
+
Ser
GGA
[SRA]
>SRA1002289
SRR001308.349527
Metagenomic characterization of a wastewater treatment plant (SRP000180)
22
112
+
Ser
GGA
[SRA]
Identical group No.34515 (4 seq.)
>W1711386282
MEFD01000019
Betaproteobacteria
Rubrivivax sp. SCN 71-131 [MEFD]
55406
55316
-
Ser
GGA
[ENA]
¡û
>WENV170651174
JRYF01001824
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
551
641
+
Ser
GGA
[ENA]
¢þ
>WENV170651402
JRYF01011777
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
1513
1603
+
Ser
GGA
[ENA]
¢þ
>SRA1002043
SRR001308.206186
Metagenomic characterization of a wastewater treatment plant (SRP000180)
182
92
-
Ser
GGA
[SRA]
Identical group No.45974 (225 seq.)
>W1710822461
LKUW01000129
Betaproteobacteria
Paracidovorax citrulli [LKUW]
214139
214228
+
Ser
GGA
[ENA]
¡û
>W1710861469
LMDQ01000014
Betaproteobacteria
Acidovorax sp. Root402 [LMDQ]
833062
833151
+
Ser
GGA
[ENA]
¡û
>W1710865345
LMGP01000015
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
547245
547334
+
Ser
GGA
[ENA]
¡û
>W1710866668
LMHQ01000029
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
352518
352607
+
Ser
GGA
[ENA]
¡û
>W1710867463
LMIH01000015
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
5722
5811
+
Ser
GGA
[ENA]
¡û
>W1710867561
LMIJ01000013
Betaproteobacteria
Acidovorax sp. Root219 [LMIJ]
148613
148702
+
Ser
GGA
[ENA]
¡û
>W1710868500
LMJC01000033
Betaproteobacteria
Acidovorax sp. Root267 [LMJC]
6129
6040
-
Ser
GGA
[ENA]
¡û
>W1710868704
LMJH01000001
Betaproteobacteria
Acidovorax sp. Root275 [LMJH]
588637
588548
-
Ser
GGA
[ENA]
¡û
>W1710872376
LMLY01000010
Betaproteobacteria
Acidovorax sp. Leaf76 [LMLY]
94168
94257
+
Ser
GGA
[ENA]
¡û
>W1710872453
LMLZ01000023
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
247796
247885
+
Ser
GGA
[ENA]
¡û
>W1710872596
LMMC01000010
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
94099
94188
+
Ser
GGA
[ENA]
¡û
>W1710875973
LMOV01000012
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
163348
163259
-
Ser
GGA
[ENA]
¡û
>W1710876995
LMPT01000006
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
94169
94258
+
Ser
GGA
[ENA]
¡û
>W1710892952
LNEG01000213
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
481
392
-
Ser
GGA
[ENA]
¡û
>W1711073169
LSIH01000206
Betaproteobacteria
Acidovorax delafieldii [LSIH]
14225
14314
+
Ser
GGA
[ENA]
¡û
>W1711073548
LSIQ01000504
Betaproteobacteria
Comamonadaceae bacterium CCH12-A10 [LSIQ]
18808
18897
+
Ser
GGA
[ENA]
¡û
>W1711075804
LSKS01000312
Betaproteobacteria
Acidovorax sp. CCH12-A4 [LSKS]
9461
9372
-
Ser
GGA
[ENA]
¡û
>W1711124998
LUKZ01000009
Betaproteobacteria
Acidovorax sp. GW101-3H11 [LUKZ]
1232152
1232241
+
Ser
GGA
[ENA]
¡û
>W1711172956
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1118990
1119079
+
Ser
GGA
[ENA]
¡û
>W1711172957
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1139145
1139234
+
Ser
GGA
[ENA]
¡û
>W1711343196
MCIC01000007
Betaproteobacteria
Hydrogenophaga sp. H7 [MCIC]
35091
35180
+
Ser
GGA
[ENA]
¡û
>W1711386813
MEFU01000034
Betaproteobacteria
Comamonadaceae bacterium SCN 68-20 [MEFU]
6554
6465
-
Ser
GGA
[ENA]
¡û
>W1711394789
MERR01000024
Betaproteobacteria
Burkholderiales bacterium GWA2_64_37 [MERR]
348796
348885
+
Ser
GGA
[ENA]
¡û
>W1711501323
MKRM01000084
Betaproteobacteria
Acidovorax sp. 65-7 [MKRM]
9208
9297
+
Ser
GGA
[ENA]
¡û
>W1711503023
MKTF01000073
Betaproteobacteria
Burkholderiales bacterium 64-34 [MKTF]
91190
91279
+
Ser
GGA
[ENA]
¡û
>W1711504623
MKUT01000021
Betaproteobacteria
Burkholderiales bacterium 68-20 [MKUT]
17760
17849
+
Ser
GGA
[ENA]
¡û
>W1711504786
MKUX01000026
Betaproteobacteria
Delftia sp. 67-8 [MKUX]
223654
223565
-
Ser
GGA
[ENA]
¡û
>W1711504787
MKUX01000026
Betaproteobacteria
Delftia sp. 67-8 [MKUX]
213300
213211
-
Ser
GGA
[ENA]
¡û
>W1711574858
MNGK01000267
Betaproteobacteria
Delftia sp. 13_1_40CM_3_66_6 [MNGK]
4835
4746
-
Ser
GGA
[ENA]
¡û
>W1711575590
MNIU01000047
Betaproteobacteria
Delftia sp. 13_1_20CM_4_67_18 [MNIU]
259270
259181
-
Ser
GGA
[ENA]
¡û
>W1711575591
MNIU01000047
Betaproteobacteria
Delftia sp. 13_1_20CM_4_67_18 [MNIU]
239068
238979
-
Ser
GGA
[ENA]
¡û
>W1711853521
MYFL01000001
Betaproteobacteria
Delftia sp. K82 [MYFL]
3122049
3122138
+
Ser
GGA
[ENA]
¡û
>W1711853522
MYFL01000001
Betaproteobacteria
Delftia sp. K82 [MYFL]
3143155
3143244
+
Ser
GGA
[ENA]
¡û
>W1712049934
NFUT01000002
Betaproteobacteria
Hydrogenophaga sp. IBVHS2 [NFUT]
896567
896478
-
Ser
GGA
[ENA]
¡û
>W1712096703
NIAZ01000004
Betaproteobacteria
Acidovorax sp. T1m [NIAZ]
19350
19261
-
Ser
GGA
[ENA]
¡û
>C171049685
CP016447
Betaproteobacteria
Acidovorax sp. RAC01 [CP016447]
4419269
4419358
+
Ser
GGA
-
¡û
>C171062147
CP017420
Betaproteobacteria
Delftia tsuruhatensis CM13 [CP017420]
1875162
1875251
+
Ser
GGA
-
¡û
>C171062148
CP017420
Betaproteobacteria
Delftia tsuruhatensis CM13 [CP017420]
1885519
1885608
+
Ser
GGA
-
¡û
>C171072938
CP018101
Betaproteobacteria
Delftia sp. HK171 [CP018101]
3029725
3029636
-
Ser
GGA
-
¡û
>C171072939
CP018101
Betaproteobacteria
Delftia sp. HK171 [CP018101]
3009147
3009058
-
Ser
GGA
-
¡û
>C171089935
CP019171
Betaproteobacteria
Delftia acidovorans [CP019171]
3213324
3213235
-
Ser
GGA
-
¡û
>C171089936
CP019171
Betaproteobacteria
Delftia acidovorans [CP019171]
3193122
3193033
-
Ser
GGA
-
¡û
>C171118103
CP021361
Betaproteobacteria
Acidovorax carolinensis NA3 [CP021361]
2434348
2434437
+
Ser
GGA
-
¡û
>C171118179
CP021362
Betaproteobacteria
Acidovorax carolinensis P3 [CP021362]
1492954
1492865
-
Ser
GGA
-
¡û
>C171118205
CP021366
Betaproteobacteria
Acidovorax carolinensis P4 [CP021366]
2588141
2588230
+
Ser
GGA
-
¡û
>C171120955
CP021648
Betaproteobacteria
Acidovorax sp. T1 [CP021648]
1545802
1545713
-
Ser
GGA
-
¡û
>W131002542
AGYX01000026
Betaproteobacteria
Delftia acidovorans CCUG 274B [AGYX]
108947
109036
+
Ser
GGA
[ENA]
¡û
>W131002551
AGYX01000041
Betaproteobacteria
Delftia acidovorans CCUG 274B [AGYX]
5091
5180
+
Ser
GGA
[ENA]
¡û
>W131002597
AGYY01000010
Betaproteobacteria
Delftia acidovorans CCUG 15835 [AGYY]
136950
137039
+
Ser
GGA
[ENA]
¡û
>W131002598
AGYY01000010
Betaproteobacteria
Delftia acidovorans CCUG 15835 [AGYY]
149657
149746
+
Ser
GGA
[ENA]
¡û
>W131045636
AMRP01000097
Betaproteobacteria
Paracidovorax citrulli ZJU1106 [AMRP]
306
395
+
Ser
GGA
[ENA]
¡û
>W131227136
AUEX01000030
Betaproteobacteria
Acidovorax sp. JHL-9 [AUEX]
2670
2581
-
Ser
GGA
[ENA]
¡û
>W131239391
BANP01000057
Betaproteobacteria
Acidovorax sp. MR-S7 [BANP]
47338
47249
-
Ser
GGA
[ENA]
¡û
>C000120
CP000512
Betaproteobacteria
Paracidovorax citrulli AAC00-1 [CP000512]
3604592
3604681
+
Ser
GGA
[Ensembl]
¡û
>C000366
CP000539
Betaproteobacteria
Acidovorax sp. JS42 [CP000539]
1870836
1870925
+
Ser
GGA
[Ensembl]
¡û
>C026289
CP000542
Betaproteobacteria
Verminephrobacter eiseniae EF01-2 [CP000542]
3873822
3873911
+
Ser
GGA
[Ensembl]
¡û
>w020820
AAVD01000005
Betaproteobacteria
Delftia acidovorans SPH-1 [AAVD]
42295
42386
+
Ser
GGA
[ENA]
¡û
>w020819
AAVD01000005
Betaproteobacteria
Delftia acidovorans SPH-1 [AAVD]
22093
22184
+
Ser
GGA
[ENA]
¡û
>WENV180284737
OBID01100408
[OBID] metagenome; sludge
92
3
-
Ser
GGA
[ENA]
¢þ
>WENV181311679
OFJB01008192
[OFJB] sludge metagenome; sludge
1091
1180
+
Ser
GGA
[ENA]
¢þ
>WENV181368059
OFQG01001188
[OFQG] freshwater metagenome; Freshwater Lake
787
876
+
Ser
GGA
[ENA]
¢þ
>WENV181392012
OFRV01001837
[OFRV] freshwater metagenome; Freshwater Lake
492
403
-
Ser
GGA
[ENA]
¢þ
>WENV181414213
OGCL01000118
[OGCL] hot springs metagenome; Hot spring water
12815
12904
+
Ser
GGA
[ENA]
¢þ
>C08004064
CP000884
Betaproteobacteria
Delftia acidovorans SPH-1 [CP000884]
3261156
3261070
-
Ser
GGA
[Ensembl]
¡û
>C08004065
CP000884
Betaproteobacteria
Delftia acidovorans SPH-1 [CP000884]
3240954
3240868
-
Ser
GGA
[Ensembl]
¡û
>W141278777
JAFU01000001
Betaproteobacteria
Acidovorax sp. JHL-3 [JAFU]
2271253
2271164
-
Ser
GGA
[ENA]
¡û
>WENV183725752
PJQF01012565
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
386
297
-
Ser
GGA
[ENA]
¢þ
>WENV183727934
PJTP01007294
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
269
180
-
Ser
GGA
[ENA]
¢þ
>WENV183741773
PJUG01008930
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
520
609
+
Ser
GGA
[ENA]
¢þ
>WENV183742299
PJUH01007143
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
769
858
+
Ser
GGA
[ENA]
¢þ
>WENV183744713
PJUL01000088
[PJUL] feces metagenome; Chicken feces enriched on filter paper
79049
78960
-
Ser
GGA
[ENA]
¢þ
>WENV183745071
PJUL01001931
[PJUL] feces metagenome; Chicken feces enriched on filter paper
3416
3505
+
Ser
GGA
[ENA]
¢þ
>WENV183746268
POVV01021524
[POVV] bioreactor metagenome; anaerobic chemostat enrichment culture, galacturonate as sole carbon source, pH 8; inoculated with
635
546
-
Ser
GGA
[ENA]
¢þ
>WENV170706299
LNAP01001920
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
9
98
+
Ser
GGA
[ENA]
¢þ
>WENV170707137
LNAP01013647
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
11556
11645
+
Ser
GGA
[ENA]
¢þ
>WENV170707434
LNAP01020572
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
1371
1460
+
Ser
GGA
[ENA]
¢þ
>WENV170708613
LNAP01099655
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
324
413
+
Ser
GGA
[ENA]
¢þ
>WENV170713743
LNFM01040550
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
3085
3174
+
Ser
GGA
[ENA]
¢þ
>W141484617
JFYT01000059
Betaproteobacteria
Delftia sp. RIT313 [JFYT]
40791
40880
+
Ser
GGA
[ENA]
¡û
>W141484618
JFYT01000060
Betaproteobacteria
Delftia sp. RIT313 [JFYT]
8475
8564
+
Ser
GGA
[ENA]
¡û
>C181018983
CP016278
Betaproteobacteria
Diaphorobacter nitroreducens SL-205 [CP016278]
795541
795630
+
Ser
GGA
-
¡û
>C181088962
CP023687
Betaproteobacteria
Paracidovorax citrulli KACC17005 [CP023687]
2346775
2346864
+
Ser
GGA
-
¡û
>C191063791
CP029373
Betaproteobacteria
Paracidovorax citrulli M6 [CP029373]
4037286
4037197
-
Ser
GGA
-
¡û
>C191099899
CP033069
Betaproteobacteria
Acidovorax sp. 1608163 [CP033069]
1501678
1501589
-
Ser
GGA
-
¡û
>W09105961
AASD01000018
Betaproteobacteria
Acidovorax sp. JS42 [AASD]
59436
59525
+
Ser
GGA
[ENA]
¡û
>W09106056
AASQ01000036
Betaproteobacteria
Verminephrobacter eiseniae EF01-2 [AASQ]
18499
18588
+
Ser
GGA
[ENA]
¡û
>W09106074
AASX01000003
Betaproteobacteria
Paracidovorax citrulli subsp. citrulli AAC00-1 [AASX]
251270
251359
+
Ser
GGA
[ENA]
¡û
>C191154127
CP037867
Betaproteobacteria
Hydrogenophaga pseudoflava DSM 1084 [CP037867]
2300236
2300147
-
Ser
GGA
-
¡û
>W09117940
ACCM01000004
Betaproteobacteria
[Acidovorax] ebreus TPSY [ACCM]
187416
187505
+
Ser
GGA
[ENA]
¡û
>W09133916
ACQT01000043
Betaproteobacteria
Acidovorax delafieldii 2AN [ACQT]
8527
8438
-
Ser
GGA
[ENA]
¡û
>W141701640
JMKU01000024
Betaproteobacteria
Paracidovorax oryzae ATCC 19882 [JMKU]
3619
3530
-
Ser
GGA
[ENA]
¡û
>W141754963
JNWH01000011
Betaproteobacteria
Delftia tsuruhatensis [JNWH]
47606
47517
-
Ser
GGA
[ENA]
¡û
>W141754964
JNWH01000011
Betaproteobacteria
Delftia tsuruhatensis [JNWH]
37254
37165
-
Ser
GGA
[ENA]
¡û
>W141755033
JNWI01000011
Betaproteobacteria
Delftia sp. 670 [JNWI]
335
246
-
Ser
GGA
[ENA]
¡û
>W141755040
JNWI01000015
Betaproteobacteria
Delftia sp. 670 [JNWI]
129088
128999
-
Ser
GGA
[ENA]
¡û
>W141789913
JOUB01000005
Betaproteobacteria
Delftia acidovorans [JOUB]
2375870
2375781
-
Ser
GGA
[ENA]
¡û
>W141789914
JOUB01000005
Betaproteobacteria
Delftia acidovorans [JOUB]
2354797
2354708
-
Ser
GGA
[ENA]
¡û
>W1910179186
BJHU01000016
Betaproteobacteria
Acidovorax sp. NB1 [BJHU]
5072
4983
-
Ser
GGA
[ENA]
¡û
>W1910206336
FLCF02000007
Betaproteobacteria
Delftia acidovorans [FLCF]
198021
198110
+
Ser
GGA
[ENA]
¡û
>W1910206337
FLCF02000007
Betaproteobacteria
Delftia acidovorans [FLCF]
210717
210806
+
Ser
GGA
[ENA]
¡û
>W1910699776
MERV01000033
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_64_960 [MERV]
244687
244598
-
Ser
GGA
[ENA]
¡û
>W1910699793
MERW01000005
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19 [MERW]
166049
165960
-
Ser
GGA
[ENA]
¡û
>W1910699974
MESB01000305
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_65_48 [MESB]
5
94
+
Ser
GGA
[ENA]
¡û
>W1910700014
MESC01000364
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38 [MESC]
4859
4948
+
Ser
GGA
[ENA]
¡û
>W1910700154
MESG01000054
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 [MESG]
6274
6363
+
Ser
GGA
[ENA]
¡û
>W1910700205
MESH01000236
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_67_14 [MESH]
1204
1115
-
Ser
GGA
[ENA]
¡û
>W1910700277
MESJ01000027
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_33 [MESJ]
121883
121972
+
Ser
GGA
[ENA]
¡û
>W1910700294
MESJ01000044
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_33 [MESJ]
204465
204554
+
Ser
GGA
[ENA]
¡û
>W1910803578
MTBE01000006
Betaproteobacteria
Diaphorobacter sp. LR2014-1 [MTBE]
119637
119548
-
Ser
GGA
[ENA]
¡û
>C09104075
CP001392
Betaproteobacteria
[Acidovorax] ebreus TPSY [CP001392]
2055309
2055220
-
Ser
GGA
[Ensembl]
¡û
>W1911114336
NOIG01000011
Betaproteobacteria
Acidovorax kalamii KNDSW-TSA6 [NOIG]
51590
51501
-
Ser
GGA
[ENA]
¡û
>W1911398051
NWMV01000029
Betaproteobacteria
Macromonas nakdongensis BK-30 [NWMV]
36408
36319
-
Ser
GGA
[ENA]
¡û
>W1911497651
OCRO01000001
Betaproteobacteria
Delftia acidovorans ATCC 11299b [OCRO]
3207016
3207105
+
Ser
GGA
[ENA]
¡û
>W1911497652
OCRO01000001
Betaproteobacteria
Delftia acidovorans ATCC 11299b [OCRO]
3227229
3227318
+
Ser
GGA
[ENA]
¡û
>W1911647485
QAJN01000010
Betaproteobacteria
Paucibacter sp. KBW04 [QAJN]
309786
309697
-
Ser
GGA
[ENA]
¡û
>W1911647700
QAJR01000025
Betaproteobacteria
Acidovorax sp. FJL06 [QAJR]
76661
76572
-
Ser
GGA
[ENA]
¡û
>W1911768530
QXGR01000005
Betaproteobacteria
Simplicispira lacusdiani CPCC 100842 [QXGR]
86733
86822
+
Ser
GGA
[ENA]
¡û
>W1911775417
QXNC01000017
Betaproteobacteria
Simplicispira metamorpha NBRC 13960 [QXNC]
3218
3129
-
Ser
GGA
[ENA]
¡û
>W1810071479
PEET01000001
Betaproteobacteria
Acidovorax sp. 59 [PEET]
2635180
2635269
+
Ser
GGA
[ENA]
¡û
>W1810071596
PEEV01000001
Betaproteobacteria
Acidovorax sp. 56 [PEEV]
1693207
1693296
+
Ser
GGA
[ENA]
¡û
>W1810071668
PEEW01000001
Betaproteobacteria
Burkholderiales bacterium 23 [PEEW]
4090031
4090120
+
Ser
GGA
[ENA]
¡û
>W1810071669
PEEW01000001
Betaproteobacteria
Burkholderiales bacterium 23 [PEEW]
4110210
4110299
+
Ser
GGA
[ENA]
¡û
>W1810072145
PEFD01000001
Betaproteobacteria
Delftia sp. 60 [PEFD]
3041413
3041324
-
Ser
GGA
[ENA]
¡û
>W1810072146
PEFD01000001
Betaproteobacteria
Delftia sp. 60 [PEFD]
3021234
3021145
-
Ser
GGA
[ENA]
¡û
>W1810072468
PEFJ01000001
Betaproteobacteria
Acidovorax sp. 62 [PEFJ]
2438328
2438417
+
Ser
GGA
[ENA]
¡û
>W1810078519
PEKB02000006
Betaproteobacteria
Delftia acidovorans B15 [PEKB]
8386
8475
+
Ser
GGA
[ENA]
¡û
>W1810078531
PEKB02000055
Betaproteobacteria
Delftia acidovorans B15 [PEKB]
11776
11687
-
Ser
GGA
[ENA]
¡û
>SRA1002262
SRR001308.331903
Metagenomic characterization of a wastewater treatment plant (SRP000180)
217
128
-
Ser
GGA
[SRA]
>W1810089251
PGEP01000001
Betaproteobacteria
Acidovorax sp. 69 [PGEP]
1981790
1981701
-
Ser
GGA
[ENA]
¡û
>W1810173362
PJMZ01000001
Betaproteobacteria
Acidovorax sp. 30 [PJMZ]
2318659
2318570
-
Ser
GGA
[ENA]
¡û
>W1810354989
PVLQ01000023
Betaproteobacteria
Malikia granosa P1 [PVLQ]
38597
38686
+
Ser
GGA
[ENA]
¡û
>W1810474450
QAIH01000284
Betaproteobacteria
Acidovorax sp. HMWF029 [QAIH]
11071
10982
-
Ser
GGA
[ENA]
¡û
>W1810474688
QAIM01000421
Betaproteobacteria
Acidovorax sp. HMWF018 [QAIM]
20408
20497
+
Ser
GGA
[ENA]
¡û
>W1810486300
QAXU01000005
Betaproteobacteria
Acidovorax sp. CF301 [QAXU]
122215
122126
-
Ser
GGA
[ENA]
¡û
>W1810513840
QBTZ01000001
Betaproteobacteria
Acidovorax sp. 107 [QBTZ]
1178942
1178853
-
Ser
GGA
[ENA]
¡û
>W1810573123
QEKN01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5684 [QEKN]
584214
584303
+
Ser
GGA
[ENA]
¡û
>W1810573502
QEKU01000001
Betaproteobacteria
Acidovorax sp. 99 [QEKU]
156205
156294
+
Ser
GGA
[ENA]
¡û
>W1810677455
QKMS01000004
Betaproteobacteria
Acidovorax sp. OV235 [QKMS]
62455
62366
-
Ser
GGA
[ENA]
¡û
>W1810683065
QKVP01000005
Betaproteobacteria
Acidovorax sp. ST3 [QKVP]
394533
394444
-
Ser
GGA
[ENA]
¡û
>W1810696126
QLTA01000005
Betaproteobacteria
Paracidovorax anthurii CFPB 3232 [QLTA]
65858
65769
-
Ser
GGA
[ENA]
¡û
>W1810697051
QLTU01000001
Betaproteobacteria
Acidovorax defluvii DSM 12644 [QLTU]
173245
173334
+
Ser
GGA
[ENA]
¡û
>W1810750673
QOZT01000001
Betaproteobacteria
Acidovorax sp. BoFeN1 [QOZT]
20939
20850
-
Ser
GGA
[ENA]
¡û
>W1810885162
QUNC01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5596 [QUNC]
949886
949797
-
Ser
GGA
[ENA]
¡û
>ENV09000905
ABSP01058671
Freshwater sediment metagenome lwMethane_C1
148
237
+
Ser
GGA
[ENA]
¡û
>W10110546
ADCB01000008
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
92699
92610
-
Ser
GGA
[ENA]
¡û
>C11100169
CP002521
Betaproteobacteria
Paracidovorax avenae ATCC 19860 [CP002521]
2212482
2212393
-
Ser
GGA
[Ensembl]
¡û
>C11106987
CP002735
Betaproteobacteria
Delftia sp. Cs1-4 [CP002735]
4278023
4278112
+
Ser
GGA
[Ensembl]
¡û
>C11106988
CP002735
Betaproteobacteria
Delftia sp. Cs1-4 [CP002735]
4298583
4298672
+
Ser
GGA
[Ensembl]
¡û
>W11112983
ADCB01000008
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
92699
92610
-
Ser
GGA
[ENA]
¡û
>W1510742444
CYIG01000054
Betaproteobacteria
Paenacidovorax caeni R-24608 [CYIG]
1754
1665
-
Ser
GGA
[ENA]
¡û
>W1511220528
JNCQ01000003
Betaproteobacteria
Delftia lacustris LZ-C [JNCQ]
81626
81537
-
Ser
GGA
[ENA]
¡û
>W1511220529
JNCQ01000003
Betaproteobacteria
Delftia lacustris LZ-C [JNCQ]
68906
68817
-
Ser
GGA
[ENA]
¡û
>W1511305178
JPLC01000279
Gammaproteobacteria
Thermomonas brevis DSM 15422 [JPLC]
2373
2284
-
Ser
GGA
[ENA]
¡û
>W1511390779
JSYI01000130
Betaproteobacteria
Diaphorobacter sp. J5-51 [JSYI]
9840
9751
-
Ser
GGA
[ENA]
¡û
>W1511403287
JTKZ01000452
Betaproteobacteria
Delftia sp. ZNC0008 [JTKZ]
6212
6123
-
Ser
GGA
[ENA]
¡û
>W1511403297
JTKZ01000817
Betaproteobacteria
Delftia sp. ZNC0008 [JTKZ]
815
904
+
Ser
GGA
[ENA]
¡û
>W1511503070
JXDJ01000023
Betaproteobacteria
Paracidovorax citrulli tw6 [JXDJ]
434780
434691
-
Ser
GGA
[ENA]
¡û
>W1511518947
JXYQ01000060
Betaproteobacteria
Acidovorax temperans KY4 [JXYQ]
11098
11009
-
Ser
GGA
[ENA]
¡û
>W1511527444
JYHM01000023
Betaproteobacteria
Paracidovorax citrulli pslbtw65 [JYHM]
71644
71555
-
Ser
GGA
[ENA]
¡û
>W1511583321
LATT01000250
Betaproteobacteria
Delftia tsuruhatensis CM13 [LATT]
43250
43339
+
Ser
GGA
[ENA]
¡û
>W1511583331
LATT01000428
Betaproteobacteria
Delftia tsuruhatensis CM13 [LATT]
2709
2798
+
Ser
GGA
[ENA]
¡û
>W1511625819
LCZH01000023
Betaproteobacteria
Delftia tsuruhatensis MTQ3 [LCZH]
304022
303933
-
Ser
GGA
[ENA]
¡û
>W1511625820
LCZH01000023
Betaproteobacteria
Delftia tsuruhatensis MTQ3 [LCZH]
293646
293557
-
Ser
GGA
[ENA]
¡û
>W11155854
AFAL01000443
Betaproteobacteria
Verminephrobacter aporrectodeae At4 [AFAL]
3537
3626
+
Ser
GGA
[ENA]
¡û
>W11156546
AFBG01000018
Betaproteobacteria
Acidovorax radicis N35 [AFBG]
584970
584881
-
Ser
GGA
[ENA]
¡û
>W11156574
AFBH01000008
Betaproteobacteria
Acidovorax radicis N35v [AFBH]
51224
51135
-
Ser
GGA
[ENA]
¡û
>W11170771
AFPT01000104
Betaproteobacteria
Paracidovorax oryzae subsp. avenae RS-1 [AFPT]
114068
113979
-
Ser
GGA
[ENA]
¡û
>W121019076
AGTS01000044
Betaproteobacteria
Acidovorax sp. NO-1 [AGTS]
19337
19248
-
Ser
GGA
[ENA]
¡û
>W121086445
AKJX01000262
Betaproteobacteria
Acidovorax sp. CF316 [AKJX]
30911
30822
-
Ser
GGA
[ENA]
¡û
>W1610042828
BAZJ01000056
Betaproteobacteria
Diaphorobacter nitroreducens JCM 11421 [BAZJ]
5451
5540
+
Ser
GGA
[ENA]
¡û
>W1610070396
BCTF01000020
Betaproteobacteria
Hydrogenophaga flava NBRC 102514 [BCTF]
92291
92380
+
Ser
GGA
[ENA]
¡û
>W1610070838
BCTO01000023
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
90001
89912
-
Ser
GGA
[ENA]
¡û
>W1610070839
BCTO01000023
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
79641
79552
-
Ser
GGA
[ENA]
¡û
>W1610074417
BCWQ01000017
Betaproteobacteria
Hydrogenophaga pseudoflava NBRC 102511 [BCWQ]
42847
42758
-
Ser
GGA
[ENA]
¡û
>W1610074435
BCWR01000005
Betaproteobacteria
Hydrogenophaga taeniospiralis NBRC 102512 [BCWR]
294987
294898
-
Ser
GGA
[ENA]
¡û
>W1610077612
BCZP01000005
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
247295
247384
+
Ser
GGA
[ENA]
¡û
>W1610077613
BCZP01000005
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
268368
268457
+
Ser
GGA
[ENA]
¡û
>C131008669
CP003872
Betaproteobacteria
Acidovorax sp. KKS102 [CP003872]
3267614
3267703
+
Ser
GGA
[Ensembl]
¡û
>W1610599214
LFJT01000059
Betaproteobacteria
Delftia sp. JD2 [LFJT]
24704
24793
+
Ser
GGA
[ENA]
¡û
>W1610599231
LFJT01000092
Betaproteobacteria
Delftia sp. JD2 [LFJT]
5123
5212
+
Ser
GGA
[ENA]
¡û
>W1610623717
LHUP01000251
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
11086
10997
-
Ser
GGA
[ENA]
¡û
>W1610686326
LKUW01000129
Betaproteobacteria
Paracidovorax citrulli [LKUW]
214139
214228
+
Ser
GGA
[ENA]
¡û
>W1610723815
LMDQ01000014
Betaproteobacteria
Acidovorax sp. Root402 [LMDQ]
833062
833151
+
Ser
GGA
[ENA]
¡û
>W1610727691
LMGP01000015
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
547245
547334
+
Ser
GGA
[ENA]
¡û
>W1610729014
LMHQ01000029
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
352518
352607
+
Ser
GGA
[ENA]
¡û
>W1610729809
LMIH01000015
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
5722
5811
+
Ser
GGA
[ENA]
¡û
>W1610729907
LMIJ01000013
Betaproteobacteria
Acidovorax sp. Root219 [LMIJ]
148613
148702
+
Ser
GGA
[ENA]
¡û
>W1610730846
LMJC01000033
Betaproteobacteria
Acidovorax sp. Root267 [LMJC]
6129
6040
-
Ser
GGA
[ENA]
¡û
>W1610731050
LMJH01000001
Betaproteobacteria
Acidovorax sp. Root275 [LMJH]
588637
588548
-
Ser
GGA
[ENA]
¡û
>W1610734722
LMLY01000010
Betaproteobacteria
Acidovorax sp. Leaf76 [LMLY]
94168
94257
+
Ser
GGA
[ENA]
¡û
>W1610734799
LMLZ01000023
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
247796
247885
+
Ser
GGA
[ENA]
¡û
>W1610734942
LMMC01000010
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
94099
94188
+
Ser
GGA
[ENA]
¡û
>W1610738319
LMOV01000012
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
163348
163259
-
Ser
GGA
[ENA]
¡û
>W1610739341
LMPT01000006
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
94169
94258
+
Ser
GGA
[ENA]
¡û
>W1610753218
LNEG01000213
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
481
392
-
Ser
GGA
[ENA]
¡û
>W1610912474
LSIH01000206
Betaproteobacteria
Acidovorax delafieldii [LSIH]
14225
14314
+
Ser
GGA
[ENA]
¡û
>W1610912853
LSIQ01000504
Betaproteobacteria
Comamonadaceae bacterium CCH12-A10 [LSIQ]
18808
18897
+
Ser
GGA
[ENA]
¡û
>W1610915109
LSKS01000312
Betaproteobacteria
Acidovorax sp. CCH12-A4 [LSKS]
9461
9372
-
Ser
GGA
[ENA]
¡û
>W1610935931
LUKZ01000009
Betaproteobacteria
Acidovorax sp. GW101-3H11 [LUKZ]
1232152
1232241
+
Ser
GGA
[ENA]
¡û
>W1610981561
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1118990
1119079
+
Ser
GGA
[ENA]
¡û
>W1610981562
LWCN01000004
Betaproteobacteria
Delftia sp. GW456-R20 [LWCN]
1139145
1139234
+
Ser
GGA
[ENA]
¡û
>W1710039988
BAZJ01000056
Betaproteobacteria
Diaphorobacter nitroreducens JCM 11421 [BAZJ]
5451
5540
+
Ser
GGA
[ENA]
¡û
>W1710067769
BCTF01000020
Betaproteobacteria
Hydrogenophaga flava NBRC 102514 [BCTF]
92291
92380
+
Ser
GGA
[ENA]
¡û
>W1710068160
BCTO01000023
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
90001
89912
-
Ser
GGA
[ENA]
¡û
>W1710068161
BCTO01000023
Betaproteobacteria
Delftia tsuruhatensis NBRC 16741 [BCTO]
79641
79552
-
Ser
GGA
[ENA]
¡û
>W1710071535
BCWQ01000017
Betaproteobacteria
Hydrogenophaga pseudoflava NBRC 102511 [BCWQ]
42847
42758
-
Ser
GGA
[ENA]
¡û
>W1710071553
BCWR01000005
Betaproteobacteria
Hydrogenophaga taeniospiralis NBRC 102512 [BCWR]
294987
294898
-
Ser
GGA
[ENA]
¡û
>W1710075250
BCZP01000005
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
247295
247384
+
Ser
GGA
[ENA]
¡û
>W1710075251
BCZP01000005
Betaproteobacteria
Delftia acidovorans NBRC 14950 [BCZP]
268368
268457
+
Ser
GGA
[ENA]
¡û
>W1710512078
FMZC01000012
Betaproteobacteria
Paracidovorax valerianellae [FMZC]
109760
109671
-
Ser
GGA
[ENA]
¡û
>W1710519735
FNEY01000022
Betaproteobacteria
Paracidovorax citrulli [FNEY]
6626
6537
-
Ser
GGA
[ENA]
¡û
>W1710522979
FNHP01000001
Betaproteobacteria
Oryzisolibacter propanilivorax EPL6 [FNHP]
387289
387200
-
Ser
GGA
[ENA]
¡û
>W1710525321
FNJL01000031
Betaproteobacteria
Paracidovorax cattleyae [FNJL]
70841
70930
+
Ser
GGA
[ENA]
¡û
>W1710530920
FNPE01000044
Betaproteobacteria
Delftia lacustris [FNPE]
18965
18876
-
Ser
GGA
[ENA]
¡û
>W1710530921
FNPE01000044
Betaproteobacteria
Delftia lacustris [FNPE]
8590
8501
-
Ser
GGA
[ENA]
¡û
>W1710532501
FNQJ01000001
Betaproteobacteria
Acidovorax soli [FNQJ]
201974
201885
-
Ser
GGA
[ENA]
¡û
>W1710551521
FOGD01000002
Betaproteobacteria
Giesbergeria anulus [FOGD]
59857
59946
+
Ser
GGA
[ENA]
¡û
>W1710556862
FOKN01000003
Betaproteobacteria
Delftia tsuruhatensis [FOKN]
561395
561484
+
Ser
GGA
[ENA]
¡û
>W1710556863
FOKN01000003
Betaproteobacteria
Delftia tsuruhatensis [FOKN]
571755
571844
+
Ser
GGA
[ENA]
¡û
>W1710559441
FOMQ01000004
Betaproteobacteria
Paracidovorax konjaci [FOMQ]
138480
138391
-
Ser
GGA
[ENA]
¡û
>W1710561109
FONX01000001
Betaproteobacteria
Paracidovorax wautersii [FONX]
118010
118099
+
Ser
GGA
[ENA]
¡û
>W1710578888
FPBX01000049
Betaproteobacteria
Paenacidovorax caeni [FPBX]
16215
16304
+
Ser
GGA
[ENA]
¡û
>W1710720572
LFJT01000059
Betaproteobacteria
Delftia sp. JD2 [LFJT]
24704
24793
+
Ser
GGA
[ENA]
¡û
>W1710720589
LFJT01000092
Betaproteobacteria
Delftia sp. JD2 [LFJT]
5123
5212
+
Ser
GGA
[ENA]
¡û
>W1710754807
LHUP01000251
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
11086
10997
-
Ser
GGA
[ENA]
¡û
Identical group No.52720 (1 seq.)
>SRA1001974
SRR001308.157979
Metagenomic characterization of a wastewater treatment plant (SRP000180)
85
172
+
Ser
GGA
[SRA]
Identical group No.52722 (1 seq.)
>SRA1002040
SRR001308.203052
Metagenomic characterization of a wastewater treatment plant (SRP000180)
184
97
-
Ser
GGA
[SRA]
Identical group No.93345 (1 seq.)
>SRA1001874
SRR001308.104077
Metagenomic characterization of a wastewater treatment plant (SRP000180)
102
15
-
Ser
GGA
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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