tRNA genes clustered and arranged according to each identical group

Metagenomic characterization of a wastewater treatment plant (SRP000180)

Anticodon = CAA

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.93347 (1 seq.)
>SRA1002003 SRR001308.176473 Metagenomic characterization of a wastewater treatment plant (SRP000180) 239 152 - Leu CAA [SRA]
Identical group No.122849 (4 seq.)
>WENV181169066 OEIV010000213 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 19440 19356 - Leu CAA [ENA] ¢þ
>W1911647229 QAJI01000001 Bacteroidota Taibaiella sp. KBW10 [QAJI] 650208 650122 - Leu CAA [ENA] ¡û
>SRA1002073 SRR001308.226070 Metagenomic characterization of a wastewater treatment plant (SRP000180) 240 156 - Leu CAA [SRA]
>W1810762394 QPMM01000011 Bacteroidota Chitinophaga silvatica GDMCC 1.1288 [QPMM] 157074 156990 - Leu CAA [ENA] ¡û
Identical group No.123052 (1 seq.)
>SRA1001920 SRR001308.132659 Metagenomic characterization of a wastewater treatment plant (SRP000180) 142 56 - Leu CAA [SRA]
Identical group No.123056 (1 seq.)
>SRA1002041 SRR001308.203314 Metagenomic characterization of a wastewater treatment plant (SRP000180) 164 78 - Leu CAA [SRA]
Identical group No.123064 (2 seq.)
>WENV180027188 FTIX01000304 [FTIX] metagenome; soil 3910 3824 - Leu CAA [ENA] ¢þ
>SRA1002295 SRR001308.355035 Metagenomic characterization of a wastewater treatment plant (SRP000180) 131 45 - Leu CAA [SRA]
Identical group No.160414 (1 seq.)
>SRA1001971 SRR001308.156113 Metagenomic characterization of a wastewater treatment plant (SRP000180) 22 107 + Leu CAA [SRA]
Identical group No.160415 (1 seq.)
>SRA1002087 SRR001308.234591 Metagenomic characterization of a wastewater treatment plant (SRP000180) 71 156 + Leu CAA [SRA]
Identical group No.160450 (1 seq.)
>SRA1001870 SRR001308.102414 Metagenomic characterization of a wastewater treatment plant (SRP000180) 239 155 - Leu CAA [SRA]
Identical group No.184707 (6 seq.)
>W131223773 AUCH01000016 Betaproteobacteria Azovibrio restrictus DSM 23866 [AUCH] 64868 64784 - Leu CAA [ENA] ¡û
>WENV170009702 APMI01001999 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 819 735 - Leu CAA [ENA] ¢þ
>WENV170011839 APMI01095670 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 33 117 + Leu CAA [ENA] ¢þ
>W1910828090 MWUM01000030 Betaproteobacteria Zoogloea sp. LCSB751 [MWUM] 45469 45553 + Leu CAA [ENA] ¡û
>W1810005474 BFBP01000002 Betaproteobacteria Azospira sp. I13 [BFBP] 170624 170540 - Leu CAA [ENA] ¡û
>SRA1002314 SRR001308.371072 Metagenomic characterization of a wastewater treatment plant (SRP000180) 162 246 + Leu CAA [SRA]
Identical group No.190251 (2 seq.)
>SRA1001805 SRR001308.64761 Metagenomic characterization of a wastewater treatment plant (SRP000180) 250 166 - Leu CAA [SRA]
>SRA1002195 SRR001308.298410 Metagenomic characterization of a wastewater treatment plant (SRP000180) 250 166 - Leu CAA [SRA]
Identical group No.220682 (1 seq.)
>SRA1002049 SRR001308.210246 Metagenomic characterization of a wastewater treatment plant (SRP000180) 66 149 + Leu CAA [SRA]
Identical group No.232739 (1 seq.)
>SRA1001958 SRR001308.148885 Metagenomic characterization of a wastewater treatment plant (SRP000180) 254 175 - Leu CAA [SRA]
Identical group No.247833 (1 seq.)
>SRA1001905 SRR001308.117791 Metagenomic characterization of a wastewater treatment plant (SRP000180) 165 242 + Leu CAA [SRA]
Identical group No.288832 (36 seq.)
>W1711281613 LZMI01000036 Actinomycetota Gordonia sp. 852002-51296_SCH5728562-b [LZMI] 2318 2394 + Leu CAA [ENA] ¡û
>W1711281900 LZMO01000088 Actinomycetota Gordonia sp. 852002-10350_SCH5691597 [LZMO] 2320 2396 + Leu CAA [ENA] ¡û
>W1711286476 LZTC01000055 Actinomycetota Gordonia sp. 852002-50395_SCH5434458 [LZTC] 69861 69937 + Leu CAA [ENA] ¡û
>W1711286495 LZTD01000012 Actinomycetota Gordonia sp. 852002-50816_SCH5313054-a [LZTD] 6962 7038 + Leu CAA [ENA] ¡û
>W1711286565 LZTE01000053 Actinomycetota Gordonia sp. 852002-50816_SCH5313054-c [LZTE] 19691 19615 - Leu CAA [ENA] ¡û
>W1711784514 MVPX01000265 Actinomycetota Gordonia sp. i37 [MVPX] 3226 3302 + Leu CAA [ENA] ¡û
>W131186285 ARVZ01000001 Actinomycetota Gordonia polyisoprenivorans HW436 [ARVZ] 2223990 2223914 - Leu CAA [ENA] ¡û
>W131239460 BANR01000027 Actinomycetota Gordonia aichiensis NBRC 108223 [BANR] 883 807 - Leu CAA [ENA] ¡û
>W131239720 BANX01000029 Actinomycetota Gordonia soli NBRC 108243 [BANX] 25521 25597 + Leu CAA [ENA] ¡û
>WENV181371547 OFQV01016193 [OFQV] wastewater metagenome; WWTP Cannobio (Effluent) 378 452 + Leu CAA [ENA] ¢þ
>WENV181379035 OFRC01011282 [OFRC] wastewater metagenome; Exp Tend CN 10WW 709 633 - Leu CAA [ENA] ¢þ
>WENV181380814 OFRE01008357 [OFRE] wastewater metagenome; Exp Tend NO 50WW 507 583 + Leu CAA [ENA] ¢þ
>WENV170552641 CXWK01000897 [CXWK] wastewater metagenome; activated sludge 48525 48601 + Leu CAA [ENA] ¢þ
>WENV170553161 CXWK01009421 [CXWK] wastewater metagenome; activated sludge 67 141 + Leu CAA [ENA] ¢þ
>WENV170975337 MTKZ01000171 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 53906 53982 + Leu CAA [ENA] ¢þ
>C191117167 CP033972 Actinomycetota Gordonia insulae MMS17-SY073 [CP033972] 392868 392792 - Leu CAA - ¡û
>W09109077 ABTV01000006 Actinomycetota Gordonia bronchialis DSM 43247 [ABTV] 274105 274181 + Leu CAA [ENA] ¡û
>W1910424382 FVPM01000194 Actinomycetota Mycobacteroides abscessus subsp. abscessus 1064 [FVPM] 6512 6436 - Leu CAA [ENA] ¡û
>W1911747404 QWDJ02000013 Bacillota Kroppenstedtia sanguinis X0209 [QWDJ] 53863 53939 + Leu CAA [ENA] ¡û
>SRA1001835 SRR001308.81349 Metagenomic characterization of a wastewater treatment plant (SRP000180) 253 177 - Leu CAA [SRA]
>C10107070 CP001802 Actinomycetota Gordonia bronchialis DSM 43247 [CP001802] 3096174 3096250 + Leu CAA [Ensembl] ¡û
>W1511640293 LDTZ01000015 Actinomycetota Gordonia jacobaea mv1 [LDTZ] 64402 64478 + Leu CAA [ENA] ¡û
>C121006206 CP003119 Actinomycetota Gordonia polyisoprenivorans VH2 [CP003119] 3013624 3013700 + Leu CAA [Ensembl] ¡û
>W121123659 BAED01000056 Actinomycetota Gordonia amarae NBRC 15530 [BAED] 72231 72307 + Leu CAA [ENA] ¡û
>W121123707 BAEE01000063 Actinomycetota Gordonia araii NBRC 100433 [BAEE] 60449 60525 + Leu CAA [ENA] ¡û
>W121123857 BAEH01000073 Actinomycetota Gordonia effusa NBRC 100432 [BAEH] 54981 55055 + Leu CAA [ENA] ¡û
>W121124350 BAFC01000127 Actinomycetota Gordonia sputi NBRC 100414 [BAFC] 17524 17600 + Leu CAA [ENA] ¡û
>W121126597 BAHC01000164 Actinomycetota Gordonia rhizosphera NBRC 16068 [BAHC] 16012 16088 + Leu CAA [ENA] ¡û
>W1610062142 BCNF01000048 Actinomycetota Gordonia desulfuricans NBRC 100010 [BCNF] 20743 20667 - Leu CAA [ENA] ¡û
>W1611040898 LZMI01000036 Actinomycetota Gordonia sp. 852002-51296_SCH5728562-b [LZMI] 2318 2394 + Leu CAA [ENA] ¡û
>W1611041185 LZMO01000088 Actinomycetota Gordonia sp. 852002-10350_SCH5691597 [LZMO] 2320 2396 + Leu CAA [ENA] ¡û
>W1611044037 LZTC01000055 Actinomycetota Gordonia sp. 852002-50395_SCH5434458 [LZTC] 69861 69937 + Leu CAA [ENA] ¡û
>W1611044056 LZTD01000012 Actinomycetota Gordonia sp. 852002-50816_SCH5313054-a [LZTD] 6962 7038 + Leu CAA [ENA] ¡û
>W1611044126 LZTE01000053 Actinomycetota Gordonia sp. 852002-50816_SCH5313054-c [LZTE] 19691 19615 - Leu CAA [ENA] ¡û
>W1710059683 BCNF01000048 Actinomycetota Gordonia desulfuricans NBRC 100010 [BCNF] 20743 20667 - Leu CAA [ENA] ¡û
>W1710598144 FTNT01000012 Actinomycetota Williamsia sterculiae [FTNT] 16966 17042 + Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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