tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.148300 (92 seq.)
>W1710989791 LPWD01000209 Alphaproteobacteria Methyloceanibacter marginalis [LPWD] 15165 15089 - Trp CCA [ENA] ¡û
>W1710989842 LPWE01000012 Alphaproteobacteria Methyloceanibacter stevinii [LPWE] 297458 297382 - Trp CCA [ENA] ¡û
>W1710989858 LPWF01000003 Alphaproteobacteria Methyloceanibacter superfactus [LPWF] 42958 42882 - Trp CCA [ENA] ¡û
>W1710989932 LPWG01000013 Alphaproteobacteria Methyloceanibacter methanicus [LPWG] 269515 269591 + Trp CCA [ENA] ¡û
>W1711129976 LUUM01000312 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 5667 5591 - Trp CCA [ENA] ¡û
>W1711228831 LXWX01000002 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 28866 28790 - Trp CCA [ENA] ¡û
>W1711312053 MASI01000001 Alphaproteobacteria Methyloligella halotolerans [MASI] 101746 101822 + Trp CCA [ENA] ¡û
>W1711391671 MELY01000007 Alphaproteobacteria Alphaproteobacteria bacterium GWA2_41_27 [MELY] 8714 8638 - Trp CCA [ENA] ¡û
>W1711793124 MWLJ01000010 Alphaproteobacteria Rhodomicrobium vannielii [MWLJ] 73837 73761 - Trp CCA [ENA] ¡û
>W1711793191 MWLK01000026 Alphaproteobacteria Rhodomicrobium sp. R_RK_3 vannielii [MWLK] 74045 73969 - Trp CCA [ENA] ¡û
>C171115927 CP021112 Alphaproteobacteria Pseudorhodoplanes sinuspersici RIPI110 [CP021112] 4364692 4364768 + Trp CCA - ¡û
>W131163820 ARAB01000008 Alphaproteobacteria Methylosinus sp. LW4 [ARAB] 509915 509991 + Trp CCA [ENA] ¡û
>WENV013423 AACY020369809 Marine microbial communities from Global Ocean Sampling (GOS) 104 28 - Trp CCA [ENA]
>WENV180039203 LLBY010036551 [LLBY] soil metagenome; soil from tomato rhizosphere 53 129 + Trp CCA [ENA] ¢þ
>WENV180065226 MPLY02049498 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 198 274 + Trp CCA [ENA] ¢þ
>WENV180257044 OBEQ010875247 [OBEQ] groundwater metagenome; groundwater 365 289 - Trp CCA [ENA] ¢þ
>WENV180265535 OBEQ011667379 [OBEQ] groundwater metagenome; groundwater 795 871 + Trp CCA [ENA] ¢þ
>WENV180291221 OBIV01021066 [OBIV] soil metagenome; Clay 400 324 - Trp CCA [ENA] ¢þ
>WENV180342804 OBLJ01140909 [OBLJ] soil metagenome; Clay 203 279 + Trp CCA [ENA] ¢þ
>WENV180690840 OCZS010028600 [OCZS] soil metagenome; soil 1185 1109 - Trp CCA [ENA] ¢þ
>WENV181167304 OEIU01018929 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 49 125 + Trp CCA [ENA] ¢þ
>WENV181167622 OEIU01050255 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 430 506 + Trp CCA [ENA] ¢þ
>WENV181297990 OFHL01011442 [OFHL] soil metagenome; Clay 219 295 + Trp CCA [ENA] ¢þ
>WENV181401931 OFTX01026900 [OFTX] sludge metagenome; sludge 7 83 + Trp CCA [ENA] ¢þ
>W141148470 AWXZ01000003 Alphaproteobacteria Lutibaculum baratangense AMV1 [AWXZ] 17 93 + Trp CCA [ENA] ¡û
>W141216045 AZUO01000001 Alphaproteobacteria Methylosinus sp. LW3 [AZUO] 2106091 2106015 - Trp CCA [ENA] ¡û
>W141220796 AZYE01002213 Alphaproteobacteria Microvirga lupini [AZYE] 25 101 + Trp CCA [ENA] ¡û
>C08000297 AP009384 Alphaproteobacteria Azorhizobium caulinodans ORS 571 [AP009384] 983455 983531 + Trp CCA [Ensembl] ¡û
>W141241666 CAHM01000003 Alphaproteobacteria Microvirga massiliensis JC119 [CAHM] 44 120 + Trp CCA [ENA] ¡û
>C08006474 CP000943 Alphaproteobacteria Methylobacterium sp. 4-46 [CP000943] 445130 445057 - Trp CCA [Ensembl] ¡û
>W141276751 JAEA01000023 Alphaproteobacteria Microvirga flocculans ATCC BAA-817 [JAEA] 435 511 + Trp CCA [ENA] ¡û
>W141278501 JAFO01000001 Alphaproteobacteria Xanthobacter sp. 126 [JAFO] 3617869 3617793 - Trp CCA [ENA] ¡û
>WENV183623203 OOFX01030436 [OOFX] marine metagenome; sea ice 500 576 + Trp CCA [ENA] ¢þ
>WENV183724704 PJQE01052050 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 179 103 - Trp CCA [ENA] ¢þ
>WENV183796003 PVBE010217274 [PVBE] marine metagenome; water 183 259 + Trp CCA [ENA] ¢þ
>WENV170011225 APMI01050887 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1648 1572 - Trp CCA [ENA] ¢þ
>ENV08002565 ABPX01006512 microbial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat 705 629 - Trp CCA [ENA] ¡û
>WENV170396277 CEUC01242796 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 597 673 + Trp CCA [ENA] ¢þ
>WENV170708280 LNAP01065155 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 983 1059 + Trp CCA [ENA] ¢þ
>WENV170710292 LNFM01001471 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 60386 60310 - Trp CCA [ENA] ¢þ
>WENV170712478 LNFM01013802 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 225 301 + Trp CCA [ENA] ¢þ
>WENV170713799 LNFM01042342 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 483 559 + Trp CCA [ENA] ¢þ
>WENV170820795 MDSY01011000 [MDSY] marine metagenome; seawater 27 103 + Trp CCA [ENA] ¢þ
>WENV170962430 MRWF01015659 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 241 317 + Trp CCA [ENA] ¢þ
>WENV170963283 MRWG01000074 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 6792 6716 - Trp CCA [ENA] ¢þ
>W141485433 JFZJ01000063 Alphaproteobacteria Rhodomicrobium udaipurense JA643 [JFZJ] 15751 15827 + Trp CCA [ENA] ¡û
>C181020297 CP016616 Alphaproteobacteria Microvirga ossetica V5/3M [CP016616] 4413820 4413896 + Trp CCA - ¡û
>C181089617 CP023737 Alphaproteobacteria Methylosinus trichosporium OB3b [CP023737] 686478 686554 + Trp CCA - ¡û
>C181170877 CP028960 Alphaproteobacteria Methyloceanibacter sp. wino2 [CP028960] 2973300 2973376 + Trp CCA - ¡û
>C181179100 CP029481 Alphaproteobacteria Microvirga sp. 17 mud 1-3 [CP029481] 1690999 1691075 + Trp CCA - ¡û
>C181180226 CP029553 Alphaproteobacteria Methylobacterium terrae 17Sr1-28 [CP029553] 4121730 4121654 - Trp CCA - ¡û
>C191005697 AP018907 Alphaproteobacteria Blastochloris tepida GI [AP018907] 1935113 1935037 - Trp CCA - ¡û
>W141701417 JMKQ01000006 Alphaproteobacteria Methylocystis sp. LW5 [JMKQ] 452639 452563 - Trp CCA [ENA] ¡û
>W141810194 JPUG01000061 Alphaproteobacteria Microvirga sp. BSC39 aerilata [JPUG] 1238 1314 + Trp CCA [ENA] ¡û
>W141821191 JQNK01000002 Alphaproteobacteria Methylosinus sp. PW1 [JQNK] 554124 554200 + Trp CCA [ENA] ¡û
>W1910698132 MEMH01000012 Alphaproteobacteria Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_30 [MEMH] 8707 8631 - Trp CCA [ENA] ¡û
>W1911653540 QDFX01000028 Alphaproteobacteria Rhizobiaceae bacterium CPCC 101076 [QDFX] 374 450 + Trp CCA [ENA] ¡û
>W1911653592 QDGA01000048 Alphaproteobacteria Microvirga calopogonii CCBAU 65841 [QDGA] 13335 13411 + Trp CCA [ENA] ¡û
>W1911653595 QDGA01000069 Alphaproteobacteria Microvirga calopogonii CCBAU 65841 [QDGA] 24167 24091 - Trp CCA [ENA] ¡û
>W1911708756 QOZR01000024 Alphaproteobacteria Rhodospirillaceae bacterium SYSU D60014 [QOZR] 15581 15505 - Trp CCA [ENA] ¡û
>W1911765967 QXDF01000001 Alphaproteobacteria Dichotomicrobium thermohalophilum DSM 5002 [QXDF] 2032988 2032912 - Trp CCA [ENA] ¡û
>W1810330572 PUIV01000023 Alphaproteobacteria Methylosinus sporium DSM 17706 [PUIV] 55024 55100 + Trp CCA [ENA] ¡û
>W1810534750 QDAH01000080 Alphaproteobacteria Microvirga sp. KLBC 81 [QDAH] 124 200 + Trp CCA [ENA] ¡û
>W1810534752 QDAH01000142 Alphaproteobacteria Microvirga sp. KLBC 81 [QDAH] 350 426 + Trp CCA [ENA] ¡û
>W1810658593 QJJK01000006 Alphaproteobacteria Chelatococcus asaccharovorans DSM 6462 [QJJK] 440027 439951 - Trp CCA [ENA] ¡û
>W1810706702 QMKH01000014 Alphaproteobacteria Microvirga flavescens c27j1 [QMKH] 296 372 + Trp CCA [ENA] ¡û
>W1810735521 QOIO01000087 Alphaproteobacteria Microvirga aerophila DSM 21344 [QOIO] 12959 12883 - Trp CCA [ENA] ¡û
>W1810763402 QQBB01000002 Alphaproteobacteria Microvirga subterranea DSM 14364 [QQBB] 413277 413353 + Trp CCA [ENA] ¡û
>W1810763416 QQBB01000004 Alphaproteobacteria Microvirga subterranea DSM 14364 [QQBB] 473704 473780 + Trp CCA [ENA] ¡û
>C151002876 AP014648 Alphaproteobacteria Methyloceanibacter caenitepidi Gela4 [AP014648] 2400351 2400275 - Trp CCA [Ensembl] ¡û
>W10112689 ADFF01000004 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 16977 17053 + Trp CCA [ENA] ¡û
>W1510081378 CDSD01000114 Alphaproteobacteria Microvirga massiliensis JC119 [CDSD] 15913 15837 - Trp CCA [ENA] ¡û
>W10118825 ADVE01000016 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 29338 29262 - Trp CCA [ENA] ¡û
>W1510741148 CYHC01000020 Alphaproteobacteria Chelatococcus sambhunathii DSM 18167 [CYHC] 17589 17513 - Trp CCA [ENA] ¡û
>W11115916 ADFF01000004 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 16977 17053 + Trp CCA [ENA] ¡û
>C11119025 CP002292 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [CP002292] 2890374 2890298 - Trp CCA [Ensembl] ¡û
>W1511400910 JTHF01000232 Alphaproteobacteria Methylobacterium indicum SE2.11 [JTHF] 42539 42463 - Trp CCA [ENA] ¡û
>W11124997 ADVE01000016 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 29338 29262 - Trp CCA [ENA] ¡û
>W1511624247 LCYG01000011 Alphaproteobacteria Microvirga vignae BR3299 [LCYG] 27002 27078 + Trp CCA [ENA] ¡û
>W1511624293 LCYG01000101 Alphaproteobacteria Microvirga vignae BR3299 [LCYG] 16089 16013 - Trp CCA [ENA] ¡û
>C161001656 AP014854 Alphaproteobacteria Blastochloris viridis DSM 133 [AP014854] 3531938 3531862 - Trp CCA [Ensembl] ¡û
>C161048006 CP012946 Alphaproteobacteria Blastochloris viridis ATCC 19567 [CP012946] 1489250 1489326 + Trp CCA - ¡û
>C161108073 LN907867 Alphaproteobacteria Blastochloris viridis [LN907867] 889222 889298 + Trp CCA [Ensembl] ¡û
>W121068042 AJUA01000075 Alphaproteobacteria Microvirga lotononidis WSM3557 [AJUA] 484902 484978 + Trp CCA [ENA] ¡û
>W1610941049 LUUM01000312 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 5667 5591 - Trp CCA [ENA] ¡û
>W1611012748 LXWX01000002 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 28866 28790 - Trp CCA [ENA] ¡û
>W1710507597 FMVJ01000024 Alphaproteobacteria Microvirga guangxiensis [FMVJ] 145 221 + Trp CCA [ENA] ¡û
>W1710527760 FNLG01000001 Alphaproteobacteria Rhizobiales bacterium GAS113 [FNLG] 8881153 8881229 + Trp CCA [ENA] ¡û
>W1710535706 FNSS01000001 Alphaproteobacteria Rhizobiales bacterium GAS188 [FNSS] 2733381 2733305 - Trp CCA [ENA] ¡û
>W1710535972 FNSX01000001 Alphaproteobacteria Rhizobiales bacterium GAS191 [FNSX] 862278 862354 + Trp CCA [ENA] ¡û
>W1710560681 FONO01000013 Alphaproteobacteria Methylobacterium sp. yr596 [FONO] 1319 1395 + Trp CCA [ENA] ¡û
>W1710579088 FPCB01000067 Alphaproteobacteria Methylobacterium sp. 174MFSha1.1 [FPCB] 18537 18461 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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