tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.24067 (40 seq.)
>W1711027048 LRDC01000001 Gammaproteobacteria Shewanella frigidimarina [LRDC] 237731 237642 - Ser GGA [ENA] ¡û
>C022021 CP000447 Gammaproteobacteria Shewanella frigidimarina NCIMB 400 [CP000447] 2563375 2563286 - Ser GGA [Ensembl] ¡û
>w021127 AAVJ01000053 Gammaproteobacteria Shewanella pealeana ATCC 700345 [AAVJ] 18093 18184 + Ser GGA [ENA] ¡û
>W141227842 BALM01000005 Gammaproteobacteria Shewanella marina JCM 15074 [BALM] 141399 141488 + Ser GGA [ENA] ¡û
>C08010229 CP000851 Gammaproteobacteria Shewanella pealeana ATCC 700345 [CP000851] 2717655 2717569 - Ser GGA [Ensembl] ¡û
>WENV182544685 OJBI01007387 [OJBI] seawater metagenome; Sea water 29 118 + Ser GGA [ENA] ¢þ
>WENV182560451 OJDU01001478 [OJDU] seawater metagenome; Sea water 4678 4767 + Ser GGA [ENA] ¢þ
>WENV182575656 OJFV01002922 [OJFV] seawater metagenome; Sea water 475 564 + Ser GGA [ENA] ¢þ
>WENV182578821 OJGP01005337 [OJGP] seawater metagenome; Sea water 1050 961 - Ser GGA [ENA] ¢þ
>WENV182579738 OJGT01000102 [OJGT] seawater metagenome; Sea water 10898 10809 - Ser GGA [ENA] ¢þ
>C08009903 CP000931 Gammaproteobacteria Shewanella halifaxensis HAW-EB4 [CP000931] 2702926 2702840 - Ser GGA [Ensembl] ¡û
>W141276562 JADX01000009 Gammaproteobacteria Shewanella fidelis ATCC BAA-318 [JADX] 137440 137529 + Ser GGA [ENA] ¡û
>WENV183056247 OLHI01002695 [OLHI] seawater metagenome; Sea water 1806 1895 + Ser GGA [ENA] ¢þ
>WENV183064953 OLII01005048 [OLII] seawater metagenome; Sea water 1887 1976 + Ser GGA [ENA] ¢þ
>WENV170022806 BCQK01052292 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 493 404 - Ser GGA [ENA] ¢þ
>WENV170646605 JQIA01000244 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 25788 25699 - Ser GGA [ENA] ¢þ
>WENV170704742 LLEM01002419 [LLEM] bioreactor metagenome; day64 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 601 512 - Ser GGA [ENA] ¢þ
>WENV170704857 LLEN01004610 [LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 378 289 - Ser GGA [ENA] ¢þ
>WENV170780975 MAAB01028906 [MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days 4712 4623 - Ser GGA [ENA] ¢þ
>WENV170781181 MAAB01029622 [MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days 26585 26674 + Ser GGA [ENA] ¢þ
>WENV170782483 MAAC01010146 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 4713 4624 - Ser GGA [ENA] ¢þ
>WENV170782537 MAAC01010181 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 41596 41507 - Ser GGA [ENA] ¢þ
>WENV170822095 MDSY01034003 [MDSY] marine metagenome; seawater 1759 1848 + Ser GGA [ENA] ¢þ
>W09103154 AAIV01000049 Gammaproteobacteria Shewanella frigidimarina NCIMB 400 [AAIV] 10459 10370 - Ser GGA [ENA] ¡û
>C191117201 CP034015 Gammaproteobacteria Shewanella livingstonensis LMG 19866 [CP034015] 2414536 2414625 + Ser GGA - ¡û
>C191155985 CP037952 Gammaproteobacteria Parashewanella spongiae HJ039 [CP037952] 2257534 2257623 + Ser GGA - ¡û
>C191173219 CP039928 Gammaproteobacteria Shewanella sp. MEBiC00475 [CP039928] 4716298 4716209 - Ser GGA - ¡û
>C191185854 CP041036 Gammaproteobacteria Shewanella polaris SM1901 [CP041036] 2099943 2100032 + Ser GGA - ¡û
>C09109841 CP000472 Gammaproteobacteria Shewanella piezotolerans WP3 [CP000472] 2729707 2729618 - Ser GGA [Ensembl] ¡û
>W1911809491 QYYH01000068 Gammaproteobacteria Parashewanella spongiae KCTC 22492 [QYYH] 15878 15967 + Ser GGA [ENA] ¡û
>W1810005573 BFBQ01000002 Gammaproteobacteria Shewanella halifaxensis 6JANF4-E-4 [BFBQ] 1046083 1046172 + Ser GGA [ENA] ¡û
>W1810155295 PJAP01000214 Gammaproteobacteria Shewanella sp. 11B5 [PJAP] 204 293 + Ser GGA [ENA] ¡û
>W1810155940 PJAZ01000060 Gammaproteobacteria Shewanella sp. Bg11-22 [PJAZ] 33773 33862 + Ser GGA [ENA] ¡û
>W1810156285 PJBE01000013 Gammaproteobacteria Shewanella sp. Choline-02u-19 [PJBE] 1441800 1441711 - Ser GGA [ENA] ¡û
>W1810156714 PJBL01000026 Gammaproteobacteria Shewanella sp. GutCb [PJBL] 44298 44209 - Ser GGA [ENA] ¡û
>W1810156772 PJBM01000192 Gammaproteobacteria Shewanella sp. GutDb-MelDb [PJBM] 1534 1623 + Ser GGA [ENA] ¡û
>W1810157765 PJCD01000003 Gammaproteobacteria Shewanella sp. ALD9 [PJCD] 1039316 1039405 + Ser GGA [ENA] ¡û
>W1810157844 PJCE01000001 Gammaproteobacteria Shewanella sp. Actino-trap-3 [PJCE] 740289 740378 + Ser GGA [ENA] ¡û
>WENV031368 AACY021360589 Marine microbial communities from Global Ocean Sampling (GOS) 250 341 + Ser GGA [ENA]
>W1610875160 LRDC01000001 Gammaproteobacteria Shewanella frigidimarina [LRDC] 237731 237642 - Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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