tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GGA

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.14661 (1 seq.)
>W141262916 CCCS020000035 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 243812 243721 - Ser GGA [ENA] ¡û
Identical group No.20600 (51 seq.)
>W1710777629 LJBT01000003 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 46333 46243 - Ser GGA [ENA] ¡û
>W1711010494 LQRJ01000070 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 14875 14965 + Ser GGA [ENA] ¡û
>W1711168348 LVXZ01000101 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 335 425 + Ser GGA [ENA] ¡û
>W1711169895 LVZL01000093 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 81914 82004 + Ser GGA [ENA] ¡û
>W1711190241 LWRY01000037 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 51647 51557 - Ser GGA [ENA] ¡û
>W1711190389 LWRZ01000374 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 2458 2548 + Ser GGA [ENA] ¡û
>W1711190398 LWSA01000031 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 916 1006 + Ser GGA [ENA] ¡û
>W1711190537 LWSB01000151 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 44350 44260 - Ser GGA [ENA] ¡û
>W1711190626 LWSC01000230 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 15166 15256 + Ser GGA [ENA] ¡û
>W1711190705 LWSD01000192 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 44350 44260 - Ser GGA [ENA] ¡û
>W1711220208 LXQG01000102 Acidithiobacillia Acidithiobacillus caldus [LXQG] 13429 13519 + Ser GGA [ENA] ¡û
>W1711292968 LZYE01000197 Acidithiobacillia Acidithiobacillus caldus [LZYE] 37607 37697 + Ser GGA [ENA] ¡û
>W1711293015 LZYF01000156 Acidithiobacillia Acidithiobacillus caldus [LZYF] 1313 1223 - Ser GGA [ENA] ¡û
>W1711293058 LZYG01000157 Acidithiobacillia Acidithiobacillus caldus [LZYG] 947 857 - Ser GGA [ENA] ¡û
>W1711293116 LZYI01000003 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 15180 15270 + Ser GGA [ENA] ¡û
>W1711312185 MASQ01000141 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 18828 18918 + Ser GGA [ENA] ¡û
>W1711585809 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 983451 983541 + Ser GGA [ENA] ¡û
>W131231754 AUIS01000001 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 239433 239523 + Ser GGA [ENA] ¡û
>WENV181296192 OFHJ01012950 [OFHJ] soil metagenome; Clay 1038 948 - Ser GGA [ENA] ¢þ
>WENV181406246 OGCG01000045 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 22802 22712 - Ser GGA [ENA] ¢þ
>W141206756 AZMO01000002 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 15163 15253 + Ser GGA [ENA] ¡û
>W141262911 CCCS020000034 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 33562 33472 - Ser GGA [ENA] ¡û
>C08000409 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 1551894 1551984 + Ser GGA [Ensembl] ¡û
>WENV170008373 AOMP01000821 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 335 425 + Ser GGA [ENA] ¢þ
>WENV170008633 AOMQ01010424 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 92 2 - Ser GGA [ENA] ¢þ
>C181130834 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 1805450 1805360 - Ser GGA - ¡û
>C191005118 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 2784045 2784135 + Ser GGA - ¡û
>W09134924 ACVD01000087 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 2539 2449 - Ser GGA [ENA] ¡û
>W09134929 ACVD01000116 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 360 270 - Ser GGA [ENA] ¡û
>W141695595 JMEB01000189 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 2268 2178 - Ser GGA [ENA] ¡û
>W141738834 JNNH01000320 Acidithiobacillia Acidithiobacillus ferrooxidans ferriphilum [JNNH] 1429 1339 - Ser GGA [ENA] ¡û
>W1910831856 MXAV01000044 Acidithiobacillia Acidithiobacillus marinus SH [MXAV] 116828 116918 + Ser GGA [ENA] ¡û
>C09100362 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 1670787 1670877 + Ser GGA [Ensembl] ¡û
>W1810257113 PQJK01000001 Acidithiobacillia Acidithiobacillus ferridurans IO-2C [PQJK] 319923 319833 - Ser GGA [ENA] ¡û
>W1810679309 QKQP01000013 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 28387 28297 - Ser GGA [ENA] ¡û
>C151007970 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 1687150 1687060 - Ser GGA [Ensembl] ¡û
>C151007971 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 1582021 1581931 - Ser GGA [Ensembl] ¡û
>W10127963 AEFB01000189 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 7019 7109 + Ser GGA [ENA] ¡û
>C11100513 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 1880369 1880279 - Ser GGA [Ensembl] ¡û
>C11100728 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 1464512 1464602 + Ser GGA [Ensembl] ¡û
>W11135508 AEFB01000189 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 7015 7105 + Ser GGA [ENA] ¡û
>W11164274 AFJD01000005 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 20490 20400 - Ser GGA [ENA] ¡û
>W11168542 AFOH01000084 Acidithiobacillia Acidithiobacillus thiooxidans ATCC 19377 [AFOH] 3945 3855 - Ser GGA [ENA] ¡û
>W1610627882 LIEB01000001 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 46307 46217 - Ser GGA [ENA] ¡û
>W1610641815 LJBT01000003 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 46333 46243 - Ser GGA [ENA] ¡û
>W1610859014 LQRJ01000070 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 14875 14965 + Ser GGA [ENA] ¡û
>W1610978263 LVXZ01000101 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 335 425 + Ser GGA [ENA] ¡û
>W1611004680 LXQG01000102 Acidithiobacillia Acidithiobacillus caldus [LXQG] 13429 13519 + Ser GGA [ENA] ¡û
>W1611057386 MASQ01000141 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 18828 18918 + Ser GGA [ENA] ¡û
>W1710743704 LGYM01000034 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 4487 4397 - Ser GGA [ENA] ¡û
>W1710759009 LIEB01000001 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 46307 46217 - Ser GGA [ENA] ¡û
Identical group No.25115 (4 seq.)
>W1710799187 LJUK01000104 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 6627 6537 - Ser GGA [ENA] ¡û
>W1710799744 LJVB01000002 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 38756 38846 + Ser GGA [ENA] ¡û
>W1610663144 LJUK01000104 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 6627 6537 - Ser GGA [ENA] ¡û
>W1610663701 LJVB01000002 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 38756 38846 + Ser GGA [ENA] ¡û
Identical group No.30544 (1 seq.)
>C09100395 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 1033480 1033391 - Ser GGA [Ensembl] ¡û
Identical group No.34634 (6 seq.)
>W1711190363 LWRZ01000217 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 8247 8336 + Ser GGA [ENA] ¡û
>W1711190505 LWSB01000089 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 927 1016 + Ser GGA [ENA] ¡û
>W1711190715 LWSD01000254 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 1494 1405 - Ser GGA [ENA] ¡û
>W1711293124 LZYI01000014 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 15738 15649 - Ser GGA [ENA] ¡û
>W141206730 AZMO01000001 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 130216 130305 + Ser GGA [ENA] ¡û
>W141695559 JMEB01000106 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 23152 23063 - Ser GGA [ENA] ¡û
Identical group No.41685 (2 seq.)
>W10127965 AEFB01000240 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 2355 2266 - Ser GGA [ENA] ¡û
>W11135510 AEFB01000240 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 2355 2266 - Ser GGA [ENA] ¡û
Identical group No.69731 (28 seq.)
>W1710798670 LJTU01000032 Acidithiobacillia Acidithiobacillales bacterium SG8_45 [LJTU] 4783 4696 - Ser GGA [ENA] ¡û
>W1710920416 LNYN01000042 Gammaproteobacteria Legionella moravica [LNYN] 173778 173691 - Ser GGA [ENA] ¡û
>W1710920605 LNYS01000012 Gammaproteobacteria Legionella quinlivanii [LNYS] 7024 6938 - Ser GGA [ENA] ¡û
>WENV180109548 OAPK01012633 [OAPK] marine metagenome; ENVO:00002042 99 186 + Ser GGA [ENA] ¢þ
>WENV180272949 OBEQ012432628 [OBEQ] groundwater metagenome; groundwater 466 550 + Ser GGA [ENA] ¢þ
>WENV180374135 OBOJ01094817 [OBOJ] marine metagenome; seawater 271 358 + Ser GGA [ENA] ¢þ
>WENV180382450 OBOT01009330 [OBOT] marine metagenome; 0 387 474 + Ser GGA [ENA] ¢þ
>WENV180585367 OCOL01003350 [OCOL] marine metagenome; ENVO:00002010 318 231 - Ser GGA [ENA] ¢þ
>WENV180586652 OCOM01174317 [OCOM] marine metagenome; seawater 208 121 - Ser GGA [ENA] ¢þ
>WENV180637146 OCRG01000618 [OCRG] marine metagenome; seawater 3802 3889 + Ser GGA [ENA] ¢þ
>WENV181120881 OEFK01093542 [OEFK] marine metagenome; ENVO:00002010 seawater 34 121 + Ser GGA [ENA] ¢þ
>WENV170145654 CENZ01002414 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 354 267 - Ser GGA [ENA] ¢þ
>WENV170339616 CETB01144939 [CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 332 245 - Ser GGA [ENA] ¢þ
>WENV170419529 CEUM01130838 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 545 632 + Ser GGA [ENA] ¢þ
>WENV170425439 CEUP01102205 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 263 - Ser GGA [ENA] ¢þ
>WENV170768147 LXNH01012735 [LXNH] seawater metagenome; marine seawater 801 888 + Ser GGA [ENA] ¢þ
>WENV170769159 LXNH01044249 [LXNH] seawater metagenome; marine seawater 1587 1500 - Ser GGA [ENA] ¢þ
>WENV170770044 LXNH01082721 [LXNH] seawater metagenome; marine seawater 1180 1093 - Ser GGA [ENA] ¢þ
>WENV170786549 MDSV01005058 [MDSV] marine metagenome; seawater 463 550 + Ser GGA [ENA] ¢þ
>WENV170864431 MDTB01105386 [MDTB] marine metagenome; seawater 11 98 + Ser GGA [ENA] ¢þ
>WENV170901155 MDTD01165771 [MDTD] marine metagenome; seawater 86 1 - Ser GGA [ENA] ¢þ
>WENV170902062 MDTD01179474 [MDTD] marine metagenome; seawater 57937 57850 - Ser GGA [ENA] ¢þ
>W1910814175 MVJN01000002 Gammaproteobacteria Legionella quinlivanii ID143958 [MVJN] 417554 417640 + Ser GGA [ENA] ¡û
>W1911584946 PIPN01000003 Gammaproteobacteria Aliidiomarina sedimenti GBSy1 [PIPN] 266721 266808 + Ser GGA [ENA] ¡û
>W1911585017 PIPO01000006 Gammaproteobacteria Aliidiomarina soli Y4G10-17 [PIPO] 111342 111429 + Ser GGA [ENA] ¡û
>W1610662627 LJTU01000032 Acidithiobacillia Acidithiobacillales bacterium SG8_45 [LJTU] 4783 4696 - Ser GGA [ENA] ¡û
>W1610778314 LNYN01000042 Gammaproteobacteria Legionella moravica [LNYN] 173778 173691 - Ser GGA [ENA] ¡û
>W1610778503 LNYS01000012 Gammaproteobacteria Legionella quinlivanii [LNYS] 7024 6938 - Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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