tRNA genes clustered and arranged according to each identical group

Aquificota

Anticodon = TGC

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462859 (10 seq.)
>C08010701 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 825201 825127 - Ala TGC [Ensembl] ¡û
>C08010703 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 753002 752928 - Ala TGC [Ensembl] ¡û
>C08010706 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 357570 357496 - Ala TGC [Ensembl] ¡û
>W09107734 ABLS01000041 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [ABLS] 2957 3031 + Ala TGC [ENA] ¡û
>W09114553 ABZS01000001 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 18914 18988 + Ala TGC [ENA] ¡û
>W09114555 ABZS01000010 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 11882 11956 + Ala TGC [ENA] ¡û
>W09114557 ABZS01000027 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 1714 1788 + Ala TGC [ENA] ¡û
>W09114561 ABZS01000050 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 1714 1788 + Ala TGC [ENA] ¡û
>W09114573 ABZS01000123 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 1714 1788 + Ala TGC [ENA] ¡û
>ENV09004234 ADKK01000235 Hot springs metagenome ctg_1106445177583 79941 80015 + Ala TGC [ENA] ¡û
Identical group No.470428 (14 seq.)
>C000012 AE000657 Aquificota Aquifex aeolicus VF5 [AE000657] 1193850 1193922 + Ala TGC [Ensembl] ¡û
>C000039 AE000657 Aquificota Aquifex aeolicus VF5 [AE000657] 571004 570932 - Ala TGC [Ensembl] ¡û
>WENV180634594 OCRB01040248 [OCRB] metagenome; diffuse fluid 191 119 - Ala TGC [ENA] ¢þ
>WENV181209109 OFBD01006216 [OFBD] metagenome; hydrothermal vent 797 869 + Ala TGC [ENA] ¢þ
>WENV181209325 OFBE01000200 [OFBE] metagenome; hydrothermal vent 4027 3955 - Ala TGC [ENA] ¢þ
>WENV181209767 OFBF01000665 [OFBF] metagenome; hydrothermal vent 2015 1943 - Ala TGC [ENA] ¢þ
>WENV181209975 OFBG01000389 [OFBG] metagenome; hydrothermal vent 974 1046 + Ala TGC [ENA] ¢þ
>WENV181210337 OFBH01000508 [OFBH] metagenome; hydrothermal vent 1685 1613 - Ala TGC [ENA] ¢þ
>WENV181210881 OFBJ01000465 [OFBJ] metagenome; hydrothermal vent 1868 1940 + Ala TGC [ENA] ¢þ
>WENV181211261 OFBK01000569 [OFBK] metagenome; hydrothermal vent 2048 2120 + Ala TGC [ENA] ¢þ
>WENV181211614 OFBL01000262 [OFBL] metagenome; hydrothermal vent 266 338 + Ala TGC [ENA] ¢þ
>WENV181211845 OFBM01000221 [OFBM] metagenome; hydrothermal vent 4052 4124 + Ala TGC [ENA] ¢þ
>WENV181224963 OFDH01000420 [OFDH] metagenome; hydrothermal vent 4138 4066 - Ala TGC [ENA] ¢þ
>WENV181226348 OFDL01000495 [OFDL] metagenome; hydrothermal vent 2234 2162 - Ala TGC [ENA] ¢þ
Identical group No.490092 (11 seq.)
>W08004351 ABHJ01000047 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 3994 3922 - Ala TGC [ENA] ¡û
>W141734144 JNLJ01000001 Aquificota Persephonella sp. IF05-L8 [JNLJ] 558 632 + Ala TGC [ENA] ¡û
>W141734168 JNLJ01000001 Aquificota Persephonella sp. IF05-L8 [JNLJ] 584888 584814 - Ala TGC [ENA] ¡û
>W141734177 JNLJ01000002 Aquificota Persephonella sp. IF05-L8 [JNLJ] 547 473 - Ala TGC [ENA] ¡û
>W141734178 JNLJ01000003 Aquificota Persephonella sp. IF05-L8 [JNLJ] 909 837 - Ala TGC [ENA] ¡û
>W141734254 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 1760448 1760522 + Ala TGC [ENA] ¡û
>W141734273 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 324303 324229 - Ala TGC [ENA] ¡û
>C09108584 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 1092880 1092955 + Ala TGC [Ensembl] ¡û
>C09108603 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 1852308 1852233 - Ala TGC [Ensembl] ¡û
>W1911493128 OBEI01000017 Aquificota Persephonella hydrogeniphila DSM 15103 [OBEI] 3297 3223 - Ala TGC [ENA] ¡û
>ENV09001846 ACQI01015816 Hydrothermal vent metagenome LCHCB.C1 427 502 + Ala TGC [ENA] ¡û
Identical group No.516501 (8 seq.)
>WENV180287938 OBIL01016390 [OBIL] metagenome; hydrothermal vent 414 339 - Ala TGC [ENA] ¢þ
>WENV180634879 OCRB01142183 [OCRB] metagenome; diffuse fluid 144 69 - Ala TGC [ENA] ¢þ
>WENV181211416 OFBK01004697 [OFBK] metagenome; hydrothermal vent 159 84 - Ala TGC [ENA] ¢þ
>WENV181212819 OFBU01000200 [OFBU] metagenome; hydrothermal vent 4233 4308 + Ala TGC [ENA] ¢þ
>WENV181213560 OFBV01008818 [OFBV] metagenome; hydrothermal vent 222 297 + Ala TGC [ENA] ¢þ
>WENV181215536 OFCA01002112 [OFCA] metagenome; hydrothermal vent 497 422 - Ala TGC [ENA] ¢þ
>C11122336 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 1606265 1606340 + Ala TGC [Ensembl] ¡û
>C11122352 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 1171979 1171904 - Ala TGC [Ensembl] ¡û
Identical group No.541218 (1 seq.)
>W08004313 ABHJ01000001 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 295104 295176 + Ala TGC [ENA] ¡û
Identical group No.575337 (1 seq.)
>C11107385 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 496802 496877 + Ala TGC [Ensembl] ¡û
Identical group No.593821 (1 seq.)
>C161000095 AP013035 Aquificota Thermosulfidibacter takaii ABI70S6 [AP013035] 1426626 1426552 - Ala TGC [Ensembl] ¡û
Identical group No.614153 (2 seq.)
>C09109103 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 828643 828717 + Ala TGC [Ensembl] ¡û
>C09109114 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 1525365 1525291 - Ala TGC [Ensembl] ¡û
Identical group No.648681 (1 seq.)
>W141557065 JHUV01000009 Aquificota Sulfurihydrogenibium subterraneum DSM 15120 [JHUV] 94142 94216 + Ala TGC [ENA] ¡û
Identical group No.659551 (15 seq.)
>WENV181407568 OGCG01042836 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 75 4 - Ala TGC [ENA] ¢þ
>WENV181407586 OGCG01044327 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 703 632 - Ala TGC [ENA] ¢þ
>C08005593 CP001130 Aquificota Hydrogenobaculum sp. Y04AAS1 [CP001130] 1252494 1252423 - Ala TGC [Ensembl] ¡û
>C08005600 CP001130 Aquificota Hydrogenobaculum sp. Y04AAS1 [CP001130] 789572 789501 - Ala TGC [Ensembl] ¡û
>W09107144 ABFI01000022 Aquificota Hydrogenobaculum sp. Y04AAS1 [ABFI] 16428 16499 + Ala TGC [ENA] ¡û
>C151003664 CP002726 Aquificota Hydrogenobaculum sp. 3684 [CP002726] 1243639 1243568 - Ala TGC [Ensembl] ¡û
>C151003669 CP002726 Aquificota Hydrogenobaculum sp. 3684 [CP002726] 775547 775476 - Ala TGC [Ensembl] ¡û
>C151003708 CP002809 Aquificota Hydrogenobaculum sp. SHO [CP002809] 1243509 1243438 - Ala TGC [Ensembl] ¡û
>C151003713 CP002809 Aquificota Hydrogenobaculum sp. SHO [CP002809] 775602 775531 - Ala TGC [Ensembl] ¡û
>W10115216 ADJO01000021 Aquificota Hydrogenobaculum sp. SN [ADJO] 3246 3175 - Ala TGC [ENA] ¡û
>W11118802 ADJO01000021 Aquificota Hydrogenobaculum sp. SN [ADJO] 3246 3175 - Ala TGC [ENA] ¡û
>C131013403 CP004347 Aquificota Hydrogenobaculum sp. HO [CP004347] 1243833 1243762 - Ala TGC [Ensembl] ¡û
>C131013408 CP004347 Aquificota Hydrogenobaculum sp. HO [CP004347] 775575 775504 - Ala TGC [Ensembl] ¡û
>C131013715 CP004390 Aquificota Hydrogenobaculum sp. SN [CP004390] 1243796 1243725 - Ala TGC [Ensembl] ¡û
>C131013720 CP004390 Aquificota Hydrogenobaculum sp. SN [CP004390] 775541 775470 - Ala TGC [Ensembl] ¡û
Identical group No.663963 (19 seq.)
>WENV181229045 OFEJ01000130 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 9664 9735 + Ala TGC [ENA] ¢þ
>WENV181404593 OGCA01020572 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 247 318 + Ala TGC [ENA] ¢þ
>WENV181405063 OGCB01009391 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 1009 938 - Ala TGC [ENA] ¢þ
>WENV181405990 OGCE01017921 [OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA 353 424 + Ala TGC [ENA] ¢þ
>WENV181408803 OGCH01014972 [OGCH] hot springs metagenome; hot springs 190 119 - Ala TGC [ENA] ¢þ
>W141730202 JNIE01000002 Aquificota Thermocrinis jamiesonii GBS [JNIE] 340983 340912 - Ala TGC [ENA] ¡û
>C141011707 CP007028 Aquificota Thermocrinis ruber DSM 23557 [CP007028] 557101 557030 - Ala TGC - ¡û
>C10113044 CP001931 Aquificota Thermocrinis albus DSM 14484 [CP001931] 855469 855398 - Ala TGC [Ensembl] ¡û
>ENV000337 AF352543 Environmental sample from ENV division of INSDC 182 256 + Ala TGC [ENA]
>ENV000338 AF352544 Environmental sample from ENV division of INSDC 181 255 + Ala TGC [ENA]
>ENV000340 AF352545 Environmental sample from ENV division of INSDC 182 256 + Ala TGC [ENA]
>ENV000342 AF352546 Environmental sample from ENV division of INSDC 182 256 + Ala TGC [ENA]
>ENV000344 AF352547 Environmental sample from ENV division of INSDC 182 256 + Ala TGC [ENA]
>ENV000348 AF352549 Environmental sample from ENV division of INSDC 184 258 + Ala TGC [ENA]
>ENV000350 AF352550 Environmental sample from ENV division of INSDC 183 257 + Ala TGC [ENA]
>ENV000352 AF352551 Environmental sample from ENV division of INSDC 185 259 + Ala TGC [ENA]
>ENV000354 AF352552 Environmental sample from ENV division of INSDC 185 259 + Ala TGC [ENA]
>ENV000356 AF352553 Environmental sample from ENV division of INSDC 185 259 + Ala TGC [ENA]
>ENV000358 AF352554 Environmental sample from ENV division of INSDC 190 264 + Ala TGC [ENA]
Identical group No.687971 (5 seq.)
>WENV180013850 FPIC01004042 [FPIC] soil metagenome; Soil 245 173 - Ala TGC [ENA] ¢þ
>WENV181223415 OFDC01012487 [OFDC] hot springs metagenome; Water 184 256 + Ala TGC [ENA] ¢þ
>WENV170574101 FLYM01005628 [FLYM] hot springs metagenome; Sediment 212 284 + Ala TGC [ENA] ¢þ
>C10107887 AP011112 Aquificota Hydrogenobacter thermophilus TK-6 [AP011112] 246604 246532 - Ala TGC - ¡û
>C11111360 CP002221 Aquificota Hydrogenobacter thermophilus TK-6 [CP002221] 246594 246522 - Ala TGC - ¡û
Identical group No.751270 (1 seq.)
>W1911493371 OBEN01000010 Aquificota Hydrogenobacter hydrogenophilus DSM 2913 [OBEN] 55390 55319 - Ala TGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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