tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CGT

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281142 (43 seq.)
>A171007053 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 266346 266420 + Thr CGT - ¡û
>WENV180053650 MPLV02032368 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 843 770 - Thr CGT [ENA] ¢þ
>WENV180054892 MPLV02119855 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 4592 4519 - Thr CGT [ENA] ¢þ
>WENV180115444 OAPT01002037 [OAPT] marine metagenome; seawater 35 108 + Thr CGT [ENA] ¢þ
>WENV180595138 OCPB01024942 [OCPB] marine metagenome; ENVO:00002149 306 232 - Thr CGT [ENA] ¢þ
>WENV181092581 OEBK01010790 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 315 242 - Thr CGT [ENA] ¢þ
>WENV181318642 OFKA01003798 [OFKA] marine metagenome; seawater 780 853 + Thr CGT [ENA] ¢þ
>WENV181323267 OFKX01002678 [OFKX] marine metagenome; seawater 319 392 + Thr CGT [ENA] ¢þ
>WENV183797030 PVBE010298800 [PVBE] marine metagenome; water 6243 6316 + Thr CGT [ENA] ¢þ
>WENV170113560 CENF01081046 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1485 1558 + Thr CGT [ENA] ¢þ
>WENV170145704 CENZ01005377 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2082 2155 + Thr CGT [ENA] ¢þ
>WENV170154602 CEOF01210774 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2754 2827 + Thr CGT [ENA] ¢þ
>WENV170168046 CEOP01056557 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 608 535 - Thr CGT [ENA] ¢þ
>WENV170272219 CERK01054625 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1594 1667 + Thr CGT [ENA] ¢þ
>WENV170286142 CERW01057448 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 127 - Thr CGT [ENA] ¢þ
>WENV170325141 CESS01200172 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 388 + Thr CGT [ENA] ¢þ
>WENV170475618 CEVI01017676 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 879 952 + Thr CGT [ENA] ¢þ
>WENV170493342 CEVQ01355708 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2646 2573 - Thr CGT [ENA] ¢þ
>WENV170502531 CEVV01002948 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1262 1189 - Thr CGT [ENA] ¢þ
>WENV170505214 CEVW01039043 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1557 1630 + Thr CGT [ENA] ¢þ
>WENV170507475 CEVX01056184 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1270 1197 - Thr CGT [ENA] ¢þ
>WENV170532552 CEWO01050569 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 607 533 - Thr CGT [ENA] ¢þ
>WENV170532749 CEWO01066493 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 764 690 - Thr CGT [ENA] ¢þ
>WENV170599065 FUWD010060939 [FUWD] metagenome; unknown 218 291 + Thr CGT [ENA] ¢þ
>WENV170599069 FUWD010060993 [FUWD] metagenome; unknown 269 342 + Thr CGT [ENA] ¢þ
>WENV170599134 FUWD010064337 [FUWD] metagenome; unknown 448 522 + Thr CGT [ENA] ¢þ
>WENV170616805 FUWD012903613 [FUWD] metagenome; unknown 766 692 - Thr CGT [ENA] ¢þ
>WENV170616806 FUWD012903614 [FUWD] metagenome; unknown 252 178 - Thr CGT [ENA] ¢þ
>WENV170617361 FUWD012923482 [FUWD] metagenome; unknown 2999 2926 - Thr CGT [ENA] ¢þ
>WENV170620062 FUWD013025108 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA] ¢þ
>WENV170620075 FUWD013025380 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA] ¢þ
>WENV170628191 FUWD013243045 [FUWD] metagenome; unknown 1138 1065 - Thr CGT [ENA] ¢þ
>WENV170628202 FUWD013243285 [FUWD] metagenome; unknown 346 419 + Thr CGT [ENA] ¢þ
>WENV170750173 LUMG01000699 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 3365 3292 - Thr CGT [ENA] ¢þ
>WENV170756713 LUMP01000638 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 13618 13545 - Thr CGT [ENA] ¢þ
>WENV170764651 LWDU01032905 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 5106 5179 + Thr CGT [ENA] ¢þ
>WENV170804101 MDSW01041398 [MDSW] marine metagenome; seawater 392 318 - Thr CGT [ENA] ¢þ
>WENV170806795 MDSW01087088 [MDSW] marine metagenome; seawater 1053 979 - Thr CGT [ENA] ¢þ
>WENV170808070 MDSW01108658 [MDSW] marine metagenome; seawater 491 418 - Thr CGT [ENA] ¢þ
>WENV170914544 MDTE01149893 [MDTE] marine metagenome; seawater 1737 1664 - Thr CGT [ENA] ¢þ
>WENV11101377 AGBE01002111 Marine metagenome, Gulf of Maine surface waters 14746 14672 - Thr CGT [ENA] ¡û
>WENV006241 AACY020170643 Marine microbial communities from Global Ocean Sampling (GOS) 17 93 + Thr CGT [ENA]
>W1610855518 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 168317 168244 - Thr CGT [ENA] ¡û
Identical group No.299624 (8 seq.)
>A173000362 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1486211 1486138 - Thr CGT - ¡û
>W1930005180 FRFC01000003 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 414963 415036 + Thr CGT [ENA] ¡û
>W1930018041 MNED01000045 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_38_12 [MNED] 18379 18452 + Thr CGT [ENA] ¡û
>W1930018058 MNFB01000058 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_4_38_7 [MNFB] 9942 10015 + Thr CGT [ENA] ¡û
>W1930018069 MNFZ01000029 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_3_38_6 [MNFZ] 10285 10358 + Thr CGT [ENA] ¡û
>W1930018079 MNGX01000169 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_7 [MNGX] 24171 24098 - Thr CGT [ENA] ¡û
>W1930018085 MNGZ01000020 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_1 [MNGZ] 1696 1623 - Thr CGT [ENA] ¡û
>W1930018099 MNJS01000045 Nitrososphaerota Thaumarchaeota archaeon 13_1_20CM_2_39_20 [MNJS] 2406 2333 - Thr CGT [ENA] ¡û
Identical group No.301565 (10 seq.)
>A171000246 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 1317848 1317774 - Thr CGT - ¡û
>A171003402 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 1313672 1313599 - Thr CGT - ¡û
>W1910572970 JNVL01000027 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 9294 9221 - Thr CGT [ENA] ¡û
>W1910572990 JOKN01000019 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 8292 8219 - Thr CGT [ENA] ¡û
>W1910573220 JOSY01000057 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 3519 3446 - Thr CGT [ENA] ¡û
>W1910573232 JOSZ01000006 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-P11 [JOSZ] 101608 101535 - Thr CGT [ENA] ¡û
>W1910573312 JOTD01000069 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 3555 3482 - Thr CGT [ENA] ¡û
>W1610000547 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 578464 578388 - Thr CGT [ENA] ¡û
>W1610005400 AJVI01000004 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 29822 29749 - Thr CGT [ENA] ¡û
>W1610005420 AJVJ01000008 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 29827 29754 - Thr CGT [ENA] ¡û
Identical group No.301905 (1 seq.)
>A171006830 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 140081 140154 + Thr CGT - ¡û
Identical group No.321750 (2 seq.)
>A173000125 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 1334202 1334129 - Thr CGT - ¡û
>W1630000386 AJVJ01000050 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 6396 6469 + Thr CGT [ENA] ¡û
Identical group No.372251 (3 seq.)
>A171006015 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 374930 375003 + Thr CGT - ¡û
>W1910126238 BGKI01000006 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 34707 34634 - Thr CGT [ENA] ¡û
>W1610617266 LGTD01001056 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 2175 2248 + Thr CGT [ENA] ¡û
Identical group No.372641 (1 seq.)
>A171005923 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 1653765 1653692 - Thr CGT - ¡û
Identical group No.380285 (4 seq.)
>A171004099 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 286239 286312 + Thr CGT - ¡û
>WENV170271901 CERK01018003 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1225 1298 + Thr CGT [ENA] ¢þ
>WENV170489080 CEVP01043215 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 468 395 - Thr CGT [ENA] ¢þ
>W1910647542 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 447326 447399 + Thr CGT [ENA] ¡û
Identical group No.391920 (2 seq.)
>A173000184 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 2445149 2445222 + Thr CGT - ¡û
>A173000195 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 1306793 1306866 + Thr CGT - ¡û
Identical group No.393834 (4 seq.)
>A171006398 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 555434 555361 - Thr CGT - ¡û
>WENV180039009 LLBY010019262 [LLBY] soil metagenome; soil from tomato rhizosphere 25072 24999 - Thr CGT [ENA] ¢þ
>WENV180040764 LLBZ010013026 [LLBZ] soil metagenome; soil from tomato rhizosphere 25072 24999 - Thr CGT [ENA] ¢þ
>WENV180041968 LLBZ010828662 [LLBZ] soil metagenome; soil from tomato rhizosphere 486 413 - Thr CGT [ENA] ¢þ
Identical group No.398583 (10 seq.)
>At0065 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1120854 1120930 + Thr CGT [Ensembl] ¡û
>ENV004150 DQ397557 Environmental sample from ENV division of INSDC 10008 10084 + Thr CGT [ENA]
>ENV004191 DQ397620 Environmental sample from ENV division of INSDC 32864 32788 - Thr CGT [ENA]
>ENV004193 DQ397624 Environmental sample from ENV division of INSDC 8552 8476 - Thr CGT [ENA]
>ENV004205 DQ397640 Environmental sample from ENV division of INSDC 29777 29701 - Thr CGT [ENA]
>ENV004209 DQ397831 Environmental sample from ENV division of INSDC 5113 5189 + Thr CGT [ENA]
>ENV004212 DQ397833 Environmental sample from ENV division of INSDC 37638 37562 - Thr CGT [ENA]
>ENV004217 DQ397843 Environmental sample from ENV division of INSDC 7034 7110 + Thr CGT [ENA]
>ENV004223 DQ397846 Environmental sample from ENV division of INSDC 10273 10197 - Thr CGT [ENA]
>ENV004231 DQ397855 Environmental sample from ENV division of INSDC 23379 23303 - Thr CGT [ENA]
Identical group No.415946 (1 seq.)
>A173000057 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 345764 345837 + Thr CGT - ¡û
Identical group No.440184 (1 seq.)
>A171006045 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 417833 417906 + Thr CGT - ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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