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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170554272
CXWK01058245
31652
Actinomycetota
CGA
Ser
>WENV170554520
CXWK01075606
184635
Actinomycetota
CAT
Met
>WENV170553607
CXWK01025244
501899
Actinomycetota
CCC
Gly
>WENV170554414
CXWK01067839
46676
Actinomycetota
GGA
Ser
>WENV170554017
CXWK01042368
429605
Actinomycetota
CCG
Arg
>WENV170552540
CXWK01000319
281115
Actinomycetota
>WENV170553814
CXWK01032067
349114
Actinomycetota
GTT
Asn
>WENV170552908
CXWK01003656
289322
Actinomycetota
GGT
Thr
>WENV170554273
CXWK01058245
191257
Actinomycetota
CGG
Pro
>WENV170553584
CXWK01023970
177965
Actinomycetota
GTC
Asp
>WENV170552739
CXWK01001405
315976
Actinomycetota
GCC
Gly
>WENV170553428
CXWK01018023
308433
Actinomycetota
CCA
Trp
>WENV170553953
CXWK01039393
74688
Actinomycetota
CAG
Leu
>WENV170554045
CXWK01044435
281633
Actinomycetota
CCA
Trp
>WENV170552642
CXWK01000897
200607
Actinomycetota
TCT
Arg
>WENV170554101
CXWK01046490
178081
Actinomycetota
CGG
Pro
>WENV170553418
CXWK01017756
57859
Actinomycetota
GGA
Ser
>WENV170554042
CXWK01044326
179229
Actinomycetota
GTC
Asp
>WENV170554460
CXWK01071390
511498
Actinomycetota
TCC
Gly
>WENV170552588
CXWK01000515
238413
Actinomycetota
TAA
Leu
>WENV170552838
CXWK01002584
343384
Actinomycetota
GCC
Gly
>WENV170552645
CXWK01000897
329096
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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