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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183537426
OOAH01000050
235146
Actinomycetota
CGT
Thr
>WENV183537424
OOAH01000050
273786
Actinomycetota
CGT
Thr
>WENV183537422
OOAH01000050
243671
Actinomycetota
CTC
Glu
>WENV183537423
OOAH01000050
338148
Actinomycetota
CTG
Gln
>WENV183537425
OOAH01000050
113601
Actinomycetota
TAG
Leu
>WENV183537640
OOAH01000241
411554
Actinomycetota
CCC
Gly
>WENV183537639
OOAH01000241
80622
Actinomycetota
CAG
Leu
>WENV183537684
OOAH01000277
411601
Actinomycetota
CCC
Gly
>WENV183537685
OOAH01000277
80622
Actinomycetota
CAG
Leu
>WENV183537692
OOAH01000295
16222
Actinomycetota
GAG
Leu
>WENV183537780
OOAH01000460
44855
Actinomycetota
TGA
Ser
>WENV183537809
OOAH01000538
174149
Actinomycetota
GAT
Ile
>WENV183537810
OOAH01000538
235174
Actinomycetota
TGC
Ala
>WENV183537836
OOAH01000606
235199
Actinomycetota
CAC
Val
>WENV183537854
OOAH01000638
98279
Actinomycetota
GTA
Tyr
>WENV183537856
OOAH01000638
16467
Actinomycetota
GCT
Ser
>WENV183537857
OOAH01000642
166493
Actinomycetota
CTT
Lys
>WENV183537863
OOAH01000658
144826
Actinomycetota
GGG
Pro
>WENV183537879
OOAH01000679
235148
Actinomycetota
GTT
Asn
>WENV183537878
OOAH01000679
235173
Actinomycetota
GGC
Ala
>WENV183537883
OOAH01000687
235101
Actinomycetota
TTT
Lys
>WENV183537886
OOAH01000700
235348
Actinomycetota
CCT
Arg
>WENV183537921
OOAH01000802
162208
Actinomycetota
TAC
Val
>WENV183537927
OOAH01000810
23370
Actinomycetota
GCT
Ser
>WENV183537926
OOAH01000810
144700
Actinomycetota
CAT
Met
>WENV183537925
OOAH01000810
95593
Actinomycetota
>WENV183537933
OOAH01000815
243671
Actinomycetota
CTC
Glu
>WENV183537934
OOAH01000815
338148
Actinomycetota
CTG
Gln
>WENV183537963
OOAH01000940
235347
Actinomycetota
GGC
Ala
>WENV183537962
OOAH01000940
413665
Actinomycetota
TTG
Gln
>WENV183537979
OOAH01000980
145343
Actinomycetota
GGG
Pro
>WENV183537993
OOAH01001019
44862
Actinomycetota
CGA
Ser
>WENV183538020
OOAH01001081
145269
Actinomycetota
CAT
Met
>WENV183538044
OOAH01001175
145423
Actinomycetota
TCT
Arg
>WENV183538045
OOAH01001185
121510
Actinomycetota
TAA
Leu
>WENV183538058
OOAH01001264
243162
Actinomycetota
GTT
Asn
>WENV183538067
OOAH01001284
44942
Actinomycetota
TGA
Ser
>WENV183538080
OOAH01001342
254857
Actinomycetota
CCG
Arg
>WENV183538087
OOAH01001360
235194
Actinomycetota
GTG
His
>WENV183538090
OOAH01001376
119485
Actinomycetota
TAA
Leu
>WENV183538133
OOAH01001539
37070
Actinomycetota
CGA
Ser
>WENV183538150
OOAH01001658
254857
Actinomycetota
CCG
Arg
>WENV183538156
OOAH01001670
144660
Actinomycetota
TAC
Val
>WENV183538168
OOAH01001763
144595
Actinomycetota
CAA
Leu
>WENV183538177
OOAH01001860
144823
Actinomycetota
TCT
Arg
>WENV183538314
OOAH01002913
144635
Actinomycetota
TGG
Pro
>WENV183538371
OOAH01003806
145347
Actinomycetota
CAA
Leu
>WENV183538383
OOAH01004002
144825
Actinomycetota
CAT
Met
>WENV183538440
OOAH01005036
235149
Actinomycetota
CCT
Arg
>WENV183538642
OOAH01020755
144636
Actinomycetota
GAT
Ile
>WENV183538668
OOAH01025299
163764
Actinomycetota
TGG
Pro
>WENV183538770
OOAH01056396
245301
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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