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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183586094
OOCS01002678
235146
Actinomycetota
CGT
Thr
>WENV183586235
OOCS01009238
37070
Actinomycetota
CGA
Ser
>WENV183585874
OOCS01000604
201717
Actinomycetota
CTT
Lys
>WENV183586110
OOCS01003121
144600
Actinomycetota
TGG
Pro
>WENV183586232
OOCS01009012
158720
Actinomycetota
ACG
Arg
>WENV183586130
OOCS01003546
411601
Actinomycetota
CCC
Gly
>WENV183585960
OOCS01001004
23370
Actinomycetota
GCT
Ser
>WENV183586140
OOCS01003894
338239
Actinomycetota
TTC
Glu
>WENV183586004
OOCS01001288
235174
Actinomycetota
TGC
Ala
>WENV183586087
OOCS01002445
235101
Actinomycetota
TTT
Lys
>WENV183586066
OOCS01002071
121510
Actinomycetota
TAA
Leu
>WENV183585958
OOCS01001002
356045
Actinomycetota
GAC
Val
>WENV183586088
OOCS01002458
44855
Actinomycetota
TGA
Ser
>WENV183586122
OOCS01003344
235199
Actinomycetota
CAC
Val
>WENV183585959
OOCS01001002
235199
Actinomycetota
CAC
Val
>WENV183586092
OOCS01002607
44862
Actinomycetota
CGA
Ser
>WENV183586199
OOCS01006284
313386
Actinomycetota
CGT
Thr
>WENV183586024
OOCS01001447
198659
Actinomycetota
TAC
Val
>WENV183586222
OOCS01007585
254857
Actinomycetota
CCG
Arg
>WENV183586357
OOCS01032656
144700
Actinomycetota
CAT
Met
>WENV183586271
OOCS01014403
44942
Actinomycetota
TGA
Ser
>WENV183585908
OOCS01000698
295695
Actinomycetota
CTC
Glu
>WENV183586124
OOCS01003374
98279
Actinomycetota
GTA
Tyr
>WENV183585909
OOCS01000698
338148
Actinomycetota
CTG
Gln
>WENV183586257
OOCS01011797
235148
Actinomycetota
GTT
Asn
>WENV183586069
OOCS01002090
53078
Actinomycetota
GGA
Ser
>WENV183586139
OOCS01003843
176456
Actinomycetota
TCT
Arg
>WENV183586116
OOCS01003231
144825
Actinomycetota
CAT
Met
>WENV183586294
OOCS01019151
145347
Actinomycetota
CAA
Leu
>WENV183586095
OOCS01002704
235348
Actinomycetota
CCT
Arg
>WENV183586145
OOCS01004081
411554
Actinomycetota
CCC
Gly
>WENV183586200
OOCS01006284
113601
Actinomycetota
TAG
Leu
>WENV183586007
OOCS01001327
144595
Actinomycetota
CAA
Leu
>WENV183586193
OOCS01005572
235149
Actinomycetota
CCT
Arg
>WENV183586302
OOCS01019823
145269
Actinomycetota
CAT
Met
>WENV183586126
OOCS01003512
393408
Actinomycetota
TTC
Glu
>WENV183586158
OOCS01004476
144635
Actinomycetota
TGG
Pro
>WENV183586086
OOCS01002397
119485
Actinomycetota
TAA
Leu
>WENV183585954
OOCS01000991
80622
Actinomycetota
CAG
Leu
>WENV183586151
OOCS01004356
16222
Actinomycetota
GAG
Leu
>WENV183586005
OOCS01001288
235173
Actinomycetota
GGC
Ala
>WENV183586084
OOCS01002317
243162
Actinomycetota
GTT
Asn
>WENV183586103
OOCS01002836
144660
Actinomycetota
TAC
Val
>WENV183586309
OOCS01022458
95593
Actinomycetota
>WENV183586058
OOCS01001843
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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