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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183635743
OOIX01000298
289966
Actinomycetota
ACG
Arg
>WENV183635780
OOIX01006601
116479
Actinomycetota
CAA
Leu
>WENV183635756
OOIX01000971
338489
Actinomycetota
CAT
Met
>WENV183635772
OOIX01002584
428901
Actinomycetota
CCC
Gly
>WENV183635758
OOIX01001167
45149
Actinomycetota
CGA
Ser
>WENV183635770
OOIX01002386
237803
Actinomycetota
CGT
Thr
>WENV183635749
OOIX01000542
147156
Actinomycetota
GAA
Phe
>WENV183635769
OOIX01002218
339641
Actinomycetota
GAC
Val
>WENV183635767
OOIX01002218
304559
Actinomycetota
GCC
Gly
>WENV183635755
OOIX01000971
237816
Actinomycetota
GGT
Thr
>WENV183635754
OOIX01000971
96033
Actinomycetota
GTA
Tyr
>WENV183635748
OOIX01000542
147155
Actinomycetota
GTC
Asp
>WENV183635750
OOIX01000684
147348
Actinomycetota
TAA
Leu
>WENV183635736
OOIX01000099
435035
Actinomycetota
TCC
Gly
>WENV183635739
OOIX01000177
80900
Actinomycetota
TGA
Ser
>WENV183635757
OOIX01001122
147158
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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