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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183713481
PDWI01140039
281115
Actinomycetota
>WENV183704139
PDWI01000048
281498
Actinomycetota
ACG
Arg
>WENV183716236
PDWI01296237
409463
Actinomycetota
CAC
Val
>WENV183704231
PDWI01000102
201159
Actinomycetota
CAT
Met
>WENV183708295
PDWI01014500
234621
Actinomycetota
CAT
Met
>WENV183716059
PDWI01283262
234621
Actinomycetota
CAT
Met
>WENV183714393
PDWI01181473
192019
Actinomycetota
CAT
Met
>WENV183710912
PDWI01056263
281633
Actinomycetota
CCA
Trp
>WENV183704049
PDWI01000011
486950
Actinomycetota
CCC
Gly
>WENV183714403
PDWI01182075
481050
Actinomycetota
CCC
Gly
>WENV183715346
PDWI01234486
481050
Actinomycetota
CCC
Gly
>WENV183715420
PDWI01239412
481050
Actinomycetota
CCC
Gly
>WENV183715190
PDWI01226265
492718
Actinomycetota
CCC
Gly
>WENV183707388
PDWI01008199
498533
Actinomycetota
CCC
Gly
>WENV183706739
PDWI01005365
291883
Actinomycetota
CGC
Ala
>WENV183709269
PDWI01026266
291883
Actinomycetota
CGC
Ala
>WENV183705482
PDWI01001643
282568
Actinomycetota
CGT
Thr
>WENV183712638
PDWI01107906
285876
Actinomycetota
CGT
Thr
>WENV183712779
PDWI01113647
285876
Actinomycetota
CGT
Thr
>WENV183707812
PDWI01010787
298505
Actinomycetota
CTC
Glu
>WENV183713219
PDWI01129133
340379
Actinomycetota
CTC
Glu
>WENV183707811
PDWI01010787
430854
Actinomycetota
CTG
Gln
>WENV183704722
PDWI01000545
421065
Actinomycetota
CTG
Gln
>WENV183712648
PDWI01108294
442299
Actinomycetota
CTG
Gln
>WENV183710187
PDWI01041319
292678
Actinomycetota
CTT
Lys
>WENV183715451
PDWI01241498
292678
Actinomycetota
CTT
Lys
>WENV183715943
PDWI01275804
292678
Actinomycetota
CTT
Lys
>WENV183716071
PDWI01283800
292678
Actinomycetota
CTT
Lys
>WENV183713483
PDWI01140039
400421
Actinomycetota
GAC
Val
>WENV183704063
PDWI01000016
102100
Actinomycetota
GAG
Leu
>WENV183708533
PDWI01017111
50790
Actinomycetota
GAG
Leu
>WENV183705146
PDWI01001135
195667
Actinomycetota
GAT
Ile
>WENV183712112
PDWI01089375
195667
Actinomycetota
GAT
Ile
>WENV183716234
PDWI01296237
480460
Actinomycetota
GCA
Cys
>WENV183711472
PDWI01070716
56121
Actinomycetota
GGA
Ser
>WENV183715098
PDWI01221226
56121
Actinomycetota
GGA
Ser
>WENV183711063
PDWI01060426
184493
Actinomycetota
GGG
Pro
>WENV183711456
PDWI01070030
215051
Actinomycetota
GGG
Pro
>WENV183705703
PDWI01002146
215051
Actinomycetota
GGG
Pro
>WENV183709819
PDWI01034575
215051
Actinomycetota
GGG
Pro
>WENV183711165
PDWI01062392
215051
Actinomycetota
GGG
Pro
>WENV183710186
PDWI01041319
284579
Actinomycetota
GTG
His
>WENV183712314
PDWI01095402
284579
Actinomycetota
GTG
His
>WENV183709613
PDWI01031014
401853
Actinomycetota
GTT
Asn
>WENV183704817
PDWI01000664
315838
Actinomycetota
TAC
Val
>WENV183711771
PDWI01079959
482627
Actinomycetota
TCC
Gly
>WENV183713121
PDWI01125227
482627
Actinomycetota
TCC
Gly
>WENV183705490
PDWI01001658
487247
Actinomycetota
TCC
Gly
>WENV183705491
PDWI01001658
197906
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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