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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734973
PJUA01000302
102100
Actinomycetota
GAG
Leu
>WENV183734846
PJUA01000053
401484
Actinomycetota
GCC
Gly
>WENV183734790
PJUA01000012
284070
Actinomycetota
CTC
Glu
>WENV183735245
PJUA01005480
282995
Actinomycetota
TAA
Leu
>WENV183735278
PJUA01007135
100122
Actinomycetota
GAG
Leu
>WENV183734946
PJUA01000211
298209
Actinomycetota
CGT
Thr
>WENV183735309
PJUA01010463
182444
Actinomycetota
CGG
Pro
>WENV183734827
PJUA01000038
187647
Actinomycetota
GGG
Pro
>WENV183735267
PJUA01006526
289513
Actinomycetota
CTT
Lys
>WENV183735126
PJUA01001171
57288
Actinomycetota
TGA
Ser
>WENV183735094
PJUA01000886
289357
Actinomycetota
CTC
Glu
>WENV183735240
PJUA01005139
289357
Actinomycetota
CTC
Glu
>WENV183735229
PJUA01004122
20383
Actinomycetota
CGA
Ser
>WENV183735233
PJUA01004783
293553
Actinomycetota
GGC
Ala
>WENV183735175
PJUA01001874
57196
Actinomycetota
GAG
Leu
>WENV183734925
PJUA01000150
283002
Actinomycetota
ACG
Arg
>WENV183735315
PJUA01011306
283002
Actinomycetota
ACG
Arg
>WENV183734874
PJUA01000073
482627
Actinomycetota
TCC
Gly
>WENV183735144
PJUA01001217
289355
Actinomycetota
CAC
Val
>WENV183734878
PJUA01000073
283329
Actinomycetota
GTG
His
>WENV183734845
PJUA01000053
409463
Actinomycetota
CAC
Val
>WENV183735330
PJUA01012481
100124
Actinomycetota
CAG
Leu
>WENV183735191
PJUA01002266
282997
Actinomycetota
TTT
Lys
>WENV183734865
PJUA01000063
178317
Actinomycetota
CAT
Met
>WENV183734879
PJUA01000073
191938
Actinomycetota
TGG
Pro
>WENV183734789
PJUA01000012
399009
Actinomycetota
CTG
Gln
>WENV183734948
PJUA01000215
56310
Actinomycetota
GGA
Ser
>WENV183734947
PJUA01000215
179777
Actinomycetota
CGG
Pro
>WENV183735352
PJUA01015864
118175
Actinomycetota
GTA
Tyr
>WENV183734888
PJUA01000097
298207
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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