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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183733913
PJTZ01000001
284697
Alphaproteobacteria
GAA
Phe
>WENV183733901
PJTZ01000001
178576
Alphaproteobacteria
ACG
Arg
>WENV183733902
PJTZ01000001
178576
Alphaproteobacteria
ACG
Arg
>WENV183733943
PJTZ01000005
404744
Alphaproteobacteria
GCC
Gly
>WENV183733953
PJTZ01000006
337513
Alphaproteobacteria
TGT
Thr
>WENV183733951
PJTZ01000006
403581
Alphaproteobacteria
TTG
Gln
>WENV183733945
PJTZ01000006
73523
Alphaproteobacteria
CAG
Leu
>WENV183733956
PJTZ01000007
284697
Alphaproteobacteria
GAA
Phe
>WENV183733959
PJTZ01000007
399340
Alphaproteobacteria
GTT
Asn
>WENV183733972
PJTZ01000010
431636
Alphaproteobacteria
CTC
Glu
>WENV183733997
PJTZ01000015
77010
Alphaproteobacteria
GAG
Leu
>WENV183733998
PJTZ01000015
281409
Alphaproteobacteria
TTT
Lys
>WENV183733995
PJTZ01000015
480900
Alphaproteobacteria
GCA
Cys
>WENV183734013
PJTZ01000019
201940
Alphaproteobacteria
CAT
Met
>WENV183734018
PJTZ01000019
282977
Alphaproteobacteria
CAT
Met
>WENV183734019
PJTZ01000019
199536
Alphaproteobacteria
TGG
Pro
>WENV183734020
PJTZ01000020
424450
Alphaproteobacteria
GGT
Thr
>WENV183734022
PJTZ01000020
228484
Alphaproteobacteria
CCG
Arg
>WENV183734103
PJTZ01000059
400258
Alphaproteobacteria
>WENV183734134
PJTZ01000075
400945
Alphaproteobacteria
GCC
Gly
>WENV183734156
PJTZ01000112
285028
Alphaproteobacteria
CTT
Lys
>WENV183734175
PJTZ01000139
304844
Alphaproteobacteria
TAC
Val
>WENV183734212
PJTZ01000236
101069
Alphaproteobacteria
TAA
Leu
>WENV183734213
PJTZ01000240
284697
Alphaproteobacteria
GAA
Phe
>WENV183734227
PJTZ01000298
100353
Alphaproteobacteria
GTA
Tyr
>WENV183734228
PJTZ01000299
304816
Alphaproteobacteria
CGT
Thr
>WENV183734231
PJTZ01000305
282749
Alphaproteobacteria
CGC
Ala
>WENV183734236
PJTZ01000329
29610
Alphaproteobacteria
TGA
Ser
>WENV183734237
PJTZ01000332
118092
Alphaproteobacteria
CAA
Leu
>WENV183734239
PJTZ01000343
283321
Alphaproteobacteria
CGT
Thr
>WENV183734240
PJTZ01000349
106524
Alphaproteobacteria
GTA
Tyr
>WENV183734242
PJTZ01000367
73167
Alphaproteobacteria
GAG
Leu
>WENV183734245
PJTZ01000418
179894
Alphaproteobacteria
CCG
Arg
>WENV183734249
PJTZ01000471
13331
Alphaproteobacteria
GCT
Ser
>WENV183734257
PJTZ01000525
77010
Alphaproteobacteria
GAG
Leu
>WENV183734267
PJTZ01000653
399340
Alphaproteobacteria
GTT
Asn
>WENV183734269
PJTZ01000691
178576
Alphaproteobacteria
ACG
Arg
>WENV183734270
PJTZ01000691
178576
Alphaproteobacteria
ACG
Arg
>WENV183734276
PJTZ01000874
480900
Alphaproteobacteria
GCA
Cys
>WENV183734280
PJTZ01000966
30668
Alphaproteobacteria
CGA
Ser
>WENV183734283
PJTZ01001026
366050
Alphaproteobacteria
CGC
Ala
>WENV183734292
PJTZ01001123
284698
Alphaproteobacteria
TTT
Lys
>WENV183734296
PJTZ01001255
199536
Alphaproteobacteria
TGG
Pro
>WENV183734315
PJTZ01001743
302081
Alphaproteobacteria
CCA
Trp
>WENV183734328
PJTZ01002325
179858
Alphaproteobacteria
TCT
Arg
>WENV183734327
PJTZ01002325
228432
Alphaproteobacteria
TGG
Pro
>WENV183734352
PJTZ01003021
118181
Alphaproteobacteria
CAA
Leu
>WENV183734355
PJTZ01003077
469211
Alphaproteobacteria
>WENV183734383
PJTZ01004219
231487
Alphaproteobacteria
TCT
Arg
>WENV183734388
PJTZ01004481
39836
Alphaproteobacteria
GGA
Ser
>WENV183734402
PJTZ01005579
176233
Alphaproteobacteria
>WENV183734424
PJTZ01006671
398996
Alphaproteobacteria
GCC
Gly
>WENV183734427
PJTZ01007174
117819
Alphaproteobacteria
TAG
Leu
>WENV183734442
PJTZ01007835
399340
Alphaproteobacteria
GTT
Asn
>WENV183734445
PJTZ01008007
494510
Alphaproteobacteria
CTG
Gln
>WENV183734453
PJTZ01008193
354296
Alphaproteobacteria
TAC
Val
>WENV183734460
PJTZ01008476
315952
Alphaproteobacteria
GAA
Phe
>WENV183734477
PJTZ01009940
284697
Alphaproteobacteria
GAA
Phe
>WENV183734480
PJTZ01010090
225944
Alphaproteobacteria
CCT
Arg
>WENV183734500
PJTZ01012580
282658
Alphaproteobacteria
CGT
Thr
>WENV183734521
PJTZ01014473
29662
Alphaproteobacteria
GCT
Ser
>WENV183734524
PJTZ01015182
29598
Alphaproteobacteria
GGA
Ser
>WENV183734545
PJTZ01016705
13311
Alphaproteobacteria
GCT
Ser
>WENV183734546
PJTZ01016719
399044
Alphaproteobacteria
>WENV183734547
PJTZ01016719
399044
Alphaproteobacteria
>WENV183734548
PJTZ01016856
73721
Alphaproteobacteria
GAG
Leu
>WENV183734551
PJTZ01017215
176230
Alphaproteobacteria
CGG
Pro
>WENV183734571
PJTZ01019321
398998
Alphaproteobacteria
TTG
Gln
>WENV183734614
PJTZ01025336
428327
Alphaproteobacteria
GCC
Gly
>WENV183734625
PJTZ01026120
399001
Alphaproteobacteria
GAC
Val
>WENV183734656
PJTZ01033014
298198
Alphaproteobacteria
TAC
Val
>WENV183734695
PJTZ01042092
413432
Alphaproteobacteria
GGT
Thr
>WENV183734708
PJTZ01047388
482902
Alphaproteobacteria
TCC
Gly
>WENV183734712
PJTZ01049495
454954
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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