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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182428618
OIIA01000299
80612
Bacillota
GTA
Tyr
>WENV182428626
OIIA01000538
16834
Bacillota
GCT
Ser
>WENV182428630
OIIA01000768
267649
Bacillota
TAC
Val
>WENV182428634
OIIA01000768
272488
Bacillota
GAA
Phe
>WENV182428635
OIIA01000970
144668
Bacillota
GTC
Asp
>WENV182428639
OIIA01001000
147135
Bacillota
ACG
Arg
>WENV182428652
OIIA01001603
338149
Bacillota
CTC
Glu
>WENV182428653
OIIA01001603
144621
Bacillota
GTT
Asn
>WENV182428657
OIIA01001698
235197
Bacillota
GTC
Asp
>WENV182428658
OIIA01001698
250349
Bacillota
GAA
Phe
>WENV182428677
OIIA01002496
273029
Bacillota
TGT
Thr
>WENV182428680
OIIA01002496
235095
Bacillota
GGT
Thr
>WENV182428681
OIIA01002538
368876
Bacillota
GCC
Gly
>WENV182428682
OIIA01002538
287034
Bacillota
GTT
Asn
>WENV182428684
OIIA01002538
243612
Bacillota
TAC
Val
>WENV182428686
OIIA01002821
149041
Bacillota
GTC
Asp
>WENV182428691
OIIA01003495
235124
Bacillota
TGG
Pro
>WENV182428697
OIIA01004012
238945
Bacillota
GCC
Gly
>WENV182428698
OIIA01004249
58712
Bacillota
CAG
Leu
>WENV182428700
OIIA01004726
148188
Bacillota
CCG
Arg
>WENV182428701
OIIA01004783
413657
Bacillota
CCC
Gly
>WENV182428706
OIIA01006099
235098
Bacillota
GAC
Val
>WENV182428707
OIIA01006227
235079
Bacillota
GAA
Phe
>WENV182428708
OIIA01006227
249259
Bacillota
GCC
Gly
>WENV182428712
OIIA01006739
342895
Bacillota
CAT
Met
>WENV182428713
OIIA01007302
235171
Bacillota
CCA
Trp
>WENV182428714
OIIA01007302
182792
Bacillota
GTC
Asp
>WENV182428719
OIIA01007884
144612
Bacillota
TCT
Arg
>WENV182428735
OIIA01012537
411547
Bacillota
CTG
Gln
>WENV182428736
OIIA01013091
11034
Bacillota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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