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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183553010
OOBK01000212
339412
Bacteroidota
GGT
Thr
>WENV183552959
OOBK01000093
235102
Bacteroidota
CGT
Thr
>WENV183552936
OOBK01000058
237796
Bacteroidota
CGT
Thr
>WENV183553603
OOBK01018517
144657
Bacteroidota
CGG
Pro
>WENV183553664
OOBK01034153
58715
Bacteroidota
GAG
Leu
>WENV183552990
OOBK01000170
136244
Bacteroidota
TAC
Val
>WENV183553284
OOBK01001767
436206
Bacteroidota
TTG
Gln
>WENV183552931
OOBK01000049
338124
Bacteroidota
CCG
Arg
>WENV183553576
OOBK01013926
238121
Bacteroidota
CTT
Lys
>WENV183553426
OOBK01004392
338132
Bacteroidota
GCA
Cys
>WENV183553214
OOBK01001349
193809
Bacteroidota
CAT
Met
>WENV183553163
OOBK01000829
37076
Bacteroidota
TAA
Leu
>WENV183553057
OOBK01000319
301449
Bacteroidota
CGG
Pro
>WENV183553382
OOBK01003502
144656
Bacteroidota
GTG
His
>WENV183553547
OOBK01011138
235207
Bacteroidota
CAT
Met
>WENV183552980
OOBK01000143
80607
Bacteroidota
GTA
Tyr
>WENV183553306
OOBK01002023
344769
Bacteroidota
CTC
Glu
>WENV183553305
OOBK01002023
344769
Bacteroidota
CTC
Glu
>WENV183553263
OOBK01001599
52358
Bacteroidota
TGA
Ser
>WENV183553027
OOBK01000248
52358
Bacteroidota
TGA
Ser
>WENV183553015
OOBK01000220
415558
Bacteroidota
TTG
Gln
>WENV183552995
OOBK01000188
144590
Bacteroidota
GTT
Asn
>WENV183552991
OOBK01000173
95559
Bacteroidota
TAG
Leu
>WENV183552932
OOBK01000051
419272
Bacteroidota
CTG
Gln
>WENV183553098
OOBK01000499
144655
Bacteroidota
GGC
Ala
>WENV183553650
OOBK01028432
240012
Bacteroidota
CCC
Gly
>WENV183553041
OOBK01000272
44852
Bacteroidota
TAA
Leu
>WENV183553119
OOBK01000616
150485
Bacteroidota
GTT
Asn
>WENV183553118
OOBK01000616
150485
Bacteroidota
GTT
Asn
>WENV183553327
OOBK01002294
425638
Bacteroidota
CTG
Gln
>WENV183552933
OOBK01000051
16220
Bacteroidota
GGA
Ser
>WENV183553062
OOBK01000331
338125
Bacteroidota
CCT
Arg
>WENV183553604
OOBK01018595
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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