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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587261
OOCU01000026
235097
Bacteroidota
TTT
Lys
>WENV183587367
OOCU01000092
235097
Bacteroidota
TTT
Lys
>WENV183587196
OOCU01000007
235102
Bacteroidota
CGT
Thr
>WENV183587391
OOCU01000115
144657
Bacteroidota
CGG
Pro
>WENV183587750
OOCU01001457
144657
Bacteroidota
CGG
Pro
>WENV183587442
OOCU01000188
338155
Bacteroidota
CTC
Glu
>WENV183587897
OOCU01005048
339341
Bacteroidota
GGT
Thr
>WENV183587557
OOCU01000358
58715
Bacteroidota
GAG
Leu
>WENV183587659
OOCU01000689
338486
Bacteroidota
CAT
Met
>WENV183587637
OOCU01000596
338486
Bacteroidota
CAT
Met
>WENV183587561
OOCU01000367
338486
Bacteroidota
CAT
Met
>WENV183587619
OOCU01000525
415410
Bacteroidota
TTG
Gln
>WENV183587602
OOCU01000474
415410
Bacteroidota
TTG
Gln
>WENV183587596
OOCU01000458
415410
Bacteroidota
TTG
Gln
>WENV183587343
OOCU01000065
415410
Bacteroidota
TTG
Gln
>WENV183587195
OOCU01000007
338124
Bacteroidota
CCG
Arg
>WENV183587798
OOCU01001919
238121
Bacteroidota
CTT
Lys
>WENV183587612
OOCU01000491
238121
Bacteroidota
CTT
Lys
>WENV183587305
OOCU01000041
238121
Bacteroidota
CTT
Lys
>WENV183587304
OOCU01000041
238121
Bacteroidota
CTT
Lys
>WENV183587737
OOCU01001250
338132
Bacteroidota
GCA
Cys
>WENV183587696
OOCU01000836
338132
Bacteroidota
GCA
Cys
>WENV183587263
OOCU01000026
338132
Bacteroidota
GCA
Cys
>WENV183587228
OOCU01000016
338132
Bacteroidota
GCA
Cys
>WENV183587227
OOCU01000016
338132
Bacteroidota
GCA
Cys
>WENV183587187
OOCU01000006
338132
Bacteroidota
GCA
Cys
>WENV183587509
OOCU01000271
104003
Bacteroidota
TAG
Leu
>WENV183587526
OOCU01000294
193809
Bacteroidota
CAT
Met
>WENV183587400
OOCU01000123
58714
Bacteroidota
CAA
Leu
>WENV183587523
OOCU01000276
144933
Bacteroidota
TCT
Arg
>WENV183587354
OOCU01000080
144933
Bacteroidota
TCT
Arg
>WENV183587370
OOCU01000096
144656
Bacteroidota
GTG
His
>WENV183587831
OOCU01002721
235207
Bacteroidota
CAT
Met
>WENV183587429
OOCU01000165
235207
Bacteroidota
CAT
Met
>WENV183587428
OOCU01000165
235207
Bacteroidota
CAT
Met
>WENV183587302
OOCU01000040
235207
Bacteroidota
CAT
Met
>WENV183587232
OOCU01000018
235180
Bacteroidota
CCA
Trp
>WENV183587719
OOCU01000986
144596
Bacteroidota
GGC
Ala
>WENV183587572
OOCU01000385
144596
Bacteroidota
GGC
Ala
>WENV183587935
OOCU01007188
80607
Bacteroidota
GTA
Tyr
>WENV183587630
OOCU01000576
80607
Bacteroidota
GTA
Tyr
>WENV183587419
OOCU01000151
80607
Bacteroidota
GTA
Tyr
>WENV183587724
OOCU01001043
113604
Bacteroidota
>WENV183587670
OOCU01000724
113604
Bacteroidota
>WENV183587667
OOCU01000724
113604
Bacteroidota
>WENV183587280
OOCU01000035
113604
Bacteroidota
>WENV183587712
OOCU01000916
80614
Bacteroidota
>WENV183588000
OOCU01015910
52358
Bacteroidota
TGA
Ser
>WENV183587989
OOCU01013937
52358
Bacteroidota
TGA
Ser
>WENV183587465
OOCU01000220
52358
Bacteroidota
TGA
Ser
>WENV183587462
OOCU01000213
52358
Bacteroidota
TGA
Ser
>WENV183587455
OOCU01000202
52358
Bacteroidota
TGA
Ser
>WENV183587447
OOCU01000192
52358
Bacteroidota
TGA
Ser
>WENV183587385
OOCU01000104
52358
Bacteroidota
TGA
Ser
>WENV183587226
OOCU01000016
52358
Bacteroidota
TGA
Ser
>WENV183587768
OOCU01001579
144590
Bacteroidota
GTT
Asn
>WENV183587767
OOCU01001579
144590
Bacteroidota
GTT
Asn
>WENV183587581
OOCU01000419
95559
Bacteroidota
TAG
Leu
>WENV183587344
OOCU01000068
419272
Bacteroidota
CTG
Gln
>WENV183587624
OOCU01000571
144655
Bacteroidota
GGC
Ala
>WENV183587275
OOCU01000032
338164
Bacteroidota
TTC
Glu
>WENV183587274
OOCU01000032
338164
Bacteroidota
TTC
Glu
>WENV183587482
OOCU01000243
95875
Bacteroidota
TAG
Leu
>WENV183587741
OOCU01001356
240012
Bacteroidota
CCC
Gly
>WENV183587457
OOCU01000203
44852
Bacteroidota
TAA
Leu
>WENV183587242
OOCU01000022
44852
Bacteroidota
TAA
Leu
>WENV183587450
OOCU01000197
147439
Bacteroidota
TCT
Arg
>WENV183587204
OOCU01000009
150485
Bacteroidota
GTT
Asn
>WENV183587203
OOCU01000009
150485
Bacteroidota
GTT
Asn
>WENV183587202
OOCU01000009
150485
Bacteroidota
GTT
Asn
>WENV183587631
OOCU01000576
338165
Bacteroidota
GGT
Thr
>WENV183587886
OOCU01004599
132360
Bacteroidota
GGG
Pro
>WENV183587774
OOCU01001648
132360
Bacteroidota
GGG
Pro
>WENV183587346
OOCU01000068
132360
Bacteroidota
GGG
Pro
>WENV183587306
OOCU01000043
425638
Bacteroidota
CTG
Gln
>WENV183587522
OOCU01000273
425638
Bacteroidota
CTG
Gln
>WENV183587480
OOCU01000236
425638
Bacteroidota
CTG
Gln
>WENV183587713
OOCU01000916
185921
Bacteroidota
GTC
Asp
>WENV183587190
OOCU01000006
185921
Bacteroidota
GTC
Asp
>WENV183587601
OOCU01000467
23696
Bacteroidota
GCT
Ser
>WENV183587441
OOCU01000188
23696
Bacteroidota
GCT
Ser
>WENV183587710
OOCU01000896
16224
Bacteroidota
GGA
Ser
>WENV183587371
OOCU01000096
16224
Bacteroidota
GGA
Ser
>WENV183587345
OOCU01000068
16220
Bacteroidota
GGA
Ser
>WENV183587503
OOCU01000262
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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