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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183603560
OODL01000002
16999
Bacteroidota
GGA
Ser
>WENV183603568
OODL01000004
239647
Bacteroidota
TTT
Lys
>WENV183603600
OODL01000016
239647
Bacteroidota
TTT
Lys
>WENV183603628
OODL01000032
144655
Bacteroidota
GGC
Ala
>WENV183603636
OODL01000039
126966
Bacteroidota
TAC
Val
>WENV183603663
OODL01000056
155123
Bacteroidota
GTT
Asn
>WENV183603668
OODL01000064
80835
Bacteroidota
GTA
Tyr
>WENV183603706
OODL01000113
58714
Bacteroidota
CAA
Leu
>WENV183603720
OODL01000134
338125
Bacteroidota
CCT
Arg
>WENV183603724
OODL01000140
80607
Bacteroidota
GTA
Tyr
>WENV183603731
OODL01000156
341950
Bacteroidota
>WENV183603735
OODL01000161
235102
Bacteroidota
CGT
Thr
>WENV183603736
OODL01000163
58714
Bacteroidota
CAA
Leu
>WENV183603747
OODL01000181
80607
Bacteroidota
GTA
Tyr
>WENV183603749
OODL01000184
338132
Bacteroidota
GCA
Cys
>WENV183603763
OODL01000192
338132
Bacteroidota
GCA
Cys
>WENV183603770
OODL01000201
338125
Bacteroidota
CCT
Arg
>WENV183603785
OODL01000226
144659
Bacteroidota
GTG
His
>WENV183603794
OODL01000241
411629
Bacteroidota
TTG
Gln
>WENV183603803
OODL01000255
235207
Bacteroidota
CAT
Met
>WENV183603804
OODL01000256
144933
Bacteroidota
TCT
Arg
>WENV183603806
OODL01000262
144639
Bacteroidota
GGC
Ala
>WENV183603811
OODL01000268
16220
Bacteroidota
GGA
Ser
>WENV183603817
OODL01000272
59689
Bacteroidota
CAG
Leu
>WENV183603819
OODL01000279
144656
Bacteroidota
GTG
His
>WENV183603835
OODL01000305
235207
Bacteroidota
CAT
Met
>WENV183603839
OODL01000307
44852
Bacteroidota
TAA
Leu
>WENV183603841
OODL01000313
126641
Bacteroidota
TAC
Val
>WENV183603847
OODL01000330
338486
Bacteroidota
CAT
Met
>WENV183603850
OODL01000333
338132
Bacteroidota
GCA
Cys
>WENV183603852
OODL01000335
149691
Bacteroidota
GTT
Asn
>WENV183603855
OODL01000350
16999
Bacteroidota
GGA
Ser
>WENV183603857
OODL01000360
144659
Bacteroidota
GTG
His
>WENV183603858
OODL01000367
145504
Bacteroidota
TGT
Thr
>WENV183603869
OODL01000377
338155
Bacteroidota
CTC
Glu
>WENV183603873
OODL01000390
144590
Bacteroidota
GTT
Asn
>WENV183603876
OODL01000394
154643
Bacteroidota
CAT
Met
>WENV183603884
OODL01000409
80835
Bacteroidota
GTA
Tyr
>WENV183603887
OODL01000421
341950
Bacteroidota
>WENV183603926
OODL01000535
80607
Bacteroidota
GTA
Tyr
>WENV183603934
OODL01000555
80835
Bacteroidota
GTA
Tyr
>WENV183603939
OODL01000562
235165
Bacteroidota
CCA
Trp
>WENV183603949
OODL01000595
235097
Bacteroidota
TTT
Lys
>WENV183603953
OODL01000607
342206
Bacteroidota
TTC
Glu
>WENV183603972
OODL01000654
16224
Bacteroidota
GGA
Ser
>WENV183603986
OODL01000695
80835
Bacteroidota
GTA
Tyr
>WENV183603989
OODL01000720
126965
Bacteroidota
GGG
Pro
>WENV183603994
OODL01000757
144933
Bacteroidota
TCT
Arg
>WENV183604008
OODL01000810
237247
Bacteroidota
TTT
Lys
>WENV183604014
OODL01000840
243025
Bacteroidota
CAT
Met
>WENV183604018
OODL01000848
338486
Bacteroidota
CAT
Met
>WENV183604029
OODL01000880
411629
Bacteroidota
TTG
Gln
>WENV183604051
OODL01000945
44852
Bacteroidota
TAA
Leu
>WENV183604063
OODL01000986
235097
Bacteroidota
TTT
Lys
>WENV183604067
OODL01001023
144596
Bacteroidota
GGC
Ala
>WENV183604085
OODL01001093
144657
Bacteroidota
CGG
Pro
>WENV183604087
OODL01001095
95559
Bacteroidota
TAG
Leu
>WENV183604092
OODL01001101
343138
Bacteroidota
CCT
Arg
>WENV183604091
OODL01001101
338164
Bacteroidota
TTC
Glu
>WENV183604103
OODL01001151
16999
Bacteroidota
GGA
Ser
>WENV183604105
OODL01001160
149691
Bacteroidota
GTT
Asn
>WENV183604116
OODL01001209
95875
Bacteroidota
TAG
Leu
>WENV183604128
OODL01001250
338124
Bacteroidota
CCG
Arg
>WENV183604132
OODL01001278
147439
Bacteroidota
TCT
Arg
>WENV183604163
OODL01001434
80835
Bacteroidota
GTA
Tyr
>WENV183604167
OODL01001440
46165
Bacteroidota
TGA
Ser
>WENV183604168
OODL01001441
243025
Bacteroidota
CAT
Met
>WENV183604175
OODL01001492
414426
Bacteroidota
CTG
Gln
>WENV183604206
OODL01001639
235180
Bacteroidota
CCA
Trp
>WENV183604209
OODL01001661
150485
Bacteroidota
GTT
Asn
>WENV183604208
OODL01001661
150485
Bacteroidota
GTT
Asn
>WENV183604207
OODL01001661
150485
Bacteroidota
GTT
Asn
>WENV183604212
OODL01001668
338486
Bacteroidota
CAT
Met
>WENV183604213
OODL01001672
338132
Bacteroidota
GCA
Cys
>WENV183604222
OODL01001772
151960
Bacteroidota
GGC
Ala
>WENV183604240
OODL01001893
80614
Bacteroidota
>WENV183604260
OODL01002050
338132
Bacteroidota
GCA
Cys
>WENV183604264
OODL01002079
240012
Bacteroidota
CCC
Gly
>WENV183604288
OODL01002354
80835
Bacteroidota
GTA
Tyr
>WENV183604287
OODL01002354
80835
Bacteroidota
GTA
Tyr
>WENV183604321
OODL01002923
238121
Bacteroidota
CTT
Lys
>WENV183604322
OODL01002923
45423
Bacteroidota
TGA
Ser
>WENV183604355
OODL01003479
24174
Bacteroidota
GCT
Ser
>WENV183604380
OODL01003783
150845
Bacteroidota
GTC
Asp
>WENV183604419
OODL01004787
23696
Bacteroidota
GCT
Ser
>WENV183604435
OODL01005411
411543
Bacteroidota
CTG
Gln
>WENV183604505
OODL01007681
154643
Bacteroidota
CAT
Met
>WENV183604616
OODL01017038
16224
Bacteroidota
GGA
Ser
>WENV183604677
OODL01029614
153993
Bacteroidota
GAT
Ile
>WENV183604693
OODL01032673
411550
Bacteroidota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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