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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615621
OOEB01062883
306609
Bacteroidota
GAA
Phe
>WENV183615413
OOEB01013884
180185
Bacteroidota
TGC
Ala
>WENV183615523
OOEB01032036
172532
Bacteroidota
GTC
Asp
>WENV183615810
OOEB01160998
243344
Bacteroidota
TCC
Gly
>WENV183615658
OOEB01078483
154388
Bacteroidota
GTG
His
>WENV183615476
OOEB01023438
60611
Bacteroidota
GCT
Ser
>WENV183615789
OOEB01148867
338568
Bacteroidota
TTC
Glu
>WENV183615489
OOEB01024907
369129
Bacteroidota
TTC
Glu
>WENV183615491
OOEB01025643
150103
Bacteroidota
GTG
His
>WENV183615477
OOEB01023438
127414
Bacteroidota
TGG
Pro
>WENV183615766
OOEB01138108
412944
Bacteroidota
GCA
Cys
>WENV183615675
OOEB01087493
197066
Bacteroidota
GTT
Asn
>WENV183615561
OOEB01040966
235802
Bacteroidota
CAT
Met
>WENV183615856
OOEB01192373
127137
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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