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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183623444
OOGA01001327
308806
Bacteroidota
TCC
Gly
>WENV183623443
OOGA01001327
97610
Bacteroidota
GTA
Tyr
>WENV183623729
OOGA01053044
150845
Bacteroidota
GTC
Asp
>WENV183623423
OOGA01000705
294483
Bacteroidota
TTT
Lys
>WENV183623410
OOGA01000069
180185
Bacteroidota
TGC
Ala
>WENV183623615
OOGA01019709
147106
Bacteroidota
CAT
Met
>WENV183623786
OOGA01083229
338568
Bacteroidota
TTC
Glu
>WENV183623453
OOGA01001908
369129
Bacteroidota
TTC
Glu
>WENV183623597
OOGA01015675
127288
Bacteroidota
TGG
Pro
>WENV183623505
OOGA01005433
412944
Bacteroidota
GCA
Cys
>WENV183623675
OOGA01033901
235802
Bacteroidota
CAT
Met
>WENV183623562
OOGA01010474
341187
Bacteroidota
TTG
Gln
>WENV183623596
OOGA01015675
59930
Bacteroidota
GCT
Ser
>WENV183623446
OOGA01001327
341421
Bacteroidota
CCA
Trp
>WENV183623792
OOGA01084436
309421
Bacteroidota
TCC
Gly
>WENV183623791
OOGA01084436
113694
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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